Grimmia obtusifolia (grimmia_obtusifolia)
Imported from atlas release summary for Grimmia obtusifolia.
634
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
634
Candidate Genes
C4H
7.21%
C3'H/CYP98A
5.84%
BAHD
5.72%
POD
5.36%
4CL
5.01%
CYP76
4.05%
NMT
3.75%
IFS
3.34%
Other Families
59.71%
More Families (94)
T3O
41
2.44%
STR
41
2.44%
DWF4/CYP90B1
41
2.44%
F3H
40
2.38%
IFR
40
2.38%
F3'H/CYP75B
35
2.09%
BR6OX2/CYP85A2
34
2.03%
PAL
30
1.79%
UGT
30
1.79%
GS
29
1.73%
CODM/T6ODM
28
1.67%
7DLGT
28
1.67%
UFGT
28
1.67%
PYKS
27
1.61%
IO
24
1.43%
CYP71
21
1.25%
CAD
19
1.13%
H6H
18
1.07%
SMT1/SMT2/SMT3
18
1.07%
CHS
17
1.01%
T16H
15
0.89%
TRI/TRII
15
0.89%
F3'5'H/CYP75A
15
0.89%
HCT
15
0.89%
LAC
15
0.89%
RAS
15
0.89%
COMT
14
0.83%
G8O/G8H
13
0.77%
SLS
13
0.77%
CAS
12
0.72%
CNMT
11
0.66%
CSE
11
0.66%
SGD
10
0.6%
FNS
10
0.6%
7DLH
9
0.54%
8HGO
9
0.54%
CCR
9
0.54%
COR
8
0.48%
16OMT
8
0.48%
ANR
8
0.48%
CYP90D1
8
0.48%
NCS
7
0.42%
TDC
7
0.42%
SQS/FDFT1
7
0.42%
PMT
6
0.36%
DET2
6
0.36%
CPD/CYP90A1
6
0.36%
MVK
6
0.36%
AACT
6
0.36%
CYP80B1
5
0.3%
ANS/LDOX
5
0.3%
F5H/CYP84A
5
0.3%
CPR
5
0.3%
BR6OX1/CYP85A1
5
0.3%
GGPPS
5
0.3%
LAMT
4
0.24%
CYP719
4
0.24%
BBE
4
0.24%
ADC
4
0.24%
FLS
4
0.24%
TAT
4
0.24%
DWF5
4
0.24%
SQE
4
0.24%
ROT3/CYP90C1
4
0.24%
MPO
3
0.18%
DFR
3
0.18%
CHI
3
0.18%
SMO1/SMO2
3
0.18%
MVD
3
0.18%
6OMT_4OMT_SOMT
2
0.12%
ISY
2
0.12%
TYDC_DDC
2
0.12%
CCoAOMT
2
0.12%
HPPR
2
0.12%
CYP51G1
2
0.12%
HYD1
2
0.12%
FPPS
2
0.12%
HDS/IspG
2
0.12%
MCT/IspD
2
0.12%
DXR
2
0.12%
MDS/IspF
2
0.12%
HDR/IspH
2
0.12%
GES
1
0.06%
DWF7
1
0.06%
DWF1
1
0.06%
CPI1
1
0.06%
FK
1
0.06%
IDI
1
0.06%
CMK/IspE
1
0.06%
TPS
1
0.06%
DXS
1
0.06%
HMGR
1
0.06%
PMK
1
0.06%
HMGS
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 170 | 11 | POD (85) | View species results |
| Terpenoid pathway | 153 | 19 | BAHD (60) | View species results |
| Alkaloid pathway | 132 | 16 | NMT (22) | View species results |
| Flavonoid pathway | 80 | 9 | UFGT (23) | View species results |
| Rosmarinic acid pathway | 60 | 7 | C4H (19) | View species results |
| Steroid pathway | 39 | 13 | CAS (9) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 643 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 126 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| GobtHiC_scaffold_100023240 | Phenylpropanoid | POD | medium | pass | POD__00016__sp_Q6QPJ6_PRXQ_POPJC |
| GobtHiC_scaffold_100038900 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| GobtHiC_scaffold_10013080 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| GobtHiC_scaffold_10014900 | Phenylpropanoid | POD | low | borderline | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| GobtHiC_scaffold_10015300 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| GobtHiC_scaffold_10015320 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| GobtHiC_scaffold_10015330 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| GobtHiC_scaffold_10015340 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| GobtHiC_scaffold_10015410 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| GobtHiC_scaffold_10016740 | Phenylpropanoid | POD | low | borderline | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| GobtHiC_scaffold_10016890 | Phenylpropanoid | POD | medium | pass | POD__00011__sp_Q05431_APX1_ARATH |
| GobtHiC_scaffold_10020420 | Phenylpropanoid | POD | medium | pass | POD__00016__sp_Q6QPJ6_PRXQ_POPJC |
| GobtHiC_scaffold_110045590 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| GobtHiC_scaffold_110047940 | Phenylpropanoid | POD | medium | pass | POD__00018__sp_Q8H0V5_OCP3_ARATH |
| GobtHiC_scaffold_110049450 | Phenylpropanoid | POD | medium | pass | POD__00008__sp_P52574_REHY_SYNRU |
| GobtHiC_scaffold_110051920 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| GobtHiC_scaffold_110051930 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| GobtHiC_scaffold_11440059410 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| GobtHiC_scaffold_120066610 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| GobtHiC_scaffold_120066620 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| GobtHiC_scaffold_120066680 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| GobtHiC_scaffold_120067060 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| GobtHiC_scaffold_130082550 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| GobtHiC_scaffold_130084960 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| GobtHiC_scaffold_20103680 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| GobtHiC_scaffold_20111400 | Phenylpropanoid | POD | medium | pass | POD__00023__sp_Q9M7T0_PRX2F_ARATH |
| GobtHiC_scaffold_20115320 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| GobtHiC_scaffold_20115690 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| GobtHiC_scaffold_20118360 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| GobtHiC_scaffold_20124230 | Phenylpropanoid | POD | medium | pass | POD__00011__sp_Q05431_APX1_ARATH |
| GobtHiC_scaffold_30136200 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| GobtHiC_scaffold_30140130 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| GobtHiC_scaffold_30141250 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| GobtHiC_scaffold_30141970 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| GobtHiC_scaffold_30142430 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| GobtHiC_scaffold_30142810 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| GobtHiC_scaffold_30142850 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| GobtHiC_scaffold_30142950 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| GobtHiC_scaffold_30142960 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| GobtHiC_scaffold_30142970 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| GobtHiC_scaffold_30142990 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| GobtHiC_scaffold_30143000 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| GobtHiC_scaffold_30145080 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| GobtHiC_scaffold_30149120 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| GobtHiC_scaffold_30151670 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| GobtHiC_scaffold_30153640 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| GobtHiC_scaffold_30153660 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| GobtHiC_scaffold_30157340 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| GobtHiC_scaffold_30158970 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| GobtHiC_scaffold_30160970 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |