PlantSME Plant secondary metabolism enzyme database

Grimmia obtusifolia (grimmia_obtusifolia)

Imported from atlas release summary for Grimmia obtusifolia.

634
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (85) View species results
Terpenoid pathway 153 19 BAHD (60) View species results
Alkaloid pathway 132 16 NMT (22) View species results
Flavonoid pathway 80 9 UFGT (23) View species results
Rosmarinic acid pathway 60 7 C4H (19) View species results
Steroid pathway 39 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 643 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
GobtHiC_scaffold_100031360 Flavonoid 4CL low borderline
GobtHiC_scaffold_10005780 Flavonoid 4CL medium pass
GobtHiC_scaffold_110052320 Flavonoid 4CL low borderline
GobtHiC_scaffold_110053000 Flavonoid 4CL medium pass
GobtHiC_scaffold_110057510 Flavonoid 4CL medium pass
GobtHiC_scaffold_110058120 Flavonoid 4CL low borderline
GobtHiC_scaffold_110058230 Flavonoid 4CL medium pass
GobtHiC_scaffold_11910060190 Flavonoid 4CL medium pass
GobtHiC_scaffold_120064240 Flavonoid 4CL low borderline
GobtHiC_scaffold_120069710 Flavonoid 4CL low borderline
GobtHiC_scaffold_120074580 Flavonoid 4CL medium pass
GobtHiC_scaffold_120075850 Flavonoid 4CL medium pass
GobtHiC_scaffold_20102330 Flavonoid 4CL medium pass
GobtHiC_scaffold_20106810 Flavonoid 4CL low borderline
GobtHiC_scaffold_30150780 Flavonoid 4CL low borderline
GobtHiC_scaffold_30159820 Flavonoid 4CL medium pass
GobtHiC_scaffold_30160840 Flavonoid 4CL medium pass
GobtHiC_scaffold_40177930 Flavonoid 4CL medium pass
GobtHiC_scaffold_50185250 Flavonoid 4CL low borderline
GobtHiC_scaffold_50189570 Flavonoid 4CL medium pass
GobtHiC_scaffold_60199450 Flavonoid 4CL low borderline
GobtHiC_scaffold_6930216190 Flavonoid 4CL medium pass
GobtHiC_scaffold_70220820 Flavonoid 4CL medium pass
GobtHiC_scaffold_70221570 Flavonoid 4CL medium pass
GobtHiC_scaffold_80263910 Flavonoid 4CL medium pass
GobtHiC_scaffold_80263920 Flavonoid 4CL medium pass
GobtHiC_scaffold_80267340 Flavonoid 4CL low borderline
GobtHiC_scaffold_90292880 Flavonoid 4CL low borderline
GobtHiC_scaffold_130080800 Flavonoid ANR low borderline
GobtHiC_scaffold_130087550 Flavonoid ANR medium borderline
GobtHiC_scaffold_20111830 Flavonoid ANR medium borderline
GobtHiC_scaffold_40162540 Flavonoid ANR medium borderline
GobtHiC_scaffold_40171610 Flavonoid ANR low borderline
GobtHiC_scaffold_50194280 Flavonoid ANR low borderline
GobtHiC_scaffold_60209360 Flavonoid ANR medium borderline
GobtHiC_scaffold_90297200 Flavonoid ANR medium borderline
GobtHiC_scaffold_10004320 Flavonoid ANS/LDOX medium borderline
GobtHiC_scaffold_120065920 Flavonoid ANS/LDOX low borderline
GobtHiC_scaffold_30141670 Flavonoid ANS/LDOX medium borderline
GobtHiC_scaffold_60211250 Flavonoid ANS/LDOX medium pass
GobtHiC_scaffold_80259080 Flavonoid ANS/LDOX medium borderline
GobtHiC_scaffold_100029350 Flavonoid C4H low borderline
GobtHiC_scaffold_20113700 Flavonoid C4H low borderline
GobtHiC_scaffold_20117220 Flavonoid C4H medium borderline
GobtHiC_scaffold_30149170 Flavonoid C4H medium borderline
GobtHiC_scaffold_50194730 Flavonoid C4H medium borderline
GobtHiC_scaffold_90278010 Flavonoid C4H medium borderline
GobtHiC_scaffold_110057420 Flavonoid CHI low borderline
GobtHiC_scaffold_20110820 Flavonoid CHI medium pass
GobtHiC_scaffold_70230710 Flavonoid CHI medium pass