PlantSME Plant secondary metabolism enzyme database

Grimmia obtusifolia (grimmia_obtusifolia)

Imported from atlas release summary for Grimmia obtusifolia.

634
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (85) View species results
Terpenoid pathway 153 19 BAHD (60) View species results
Alkaloid pathway 132 16 NMT (22) View species results
Flavonoid pathway 80 9 UFGT (23) View species results
Rosmarinic acid pathway 60 7 C4H (19) View species results
Steroid pathway 39 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 643 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
GobtHiC_scaffold_90290060 Steroid CAS medium pass
GobtHiC_scaffold_100033930 Steroid CPD/CYP90A1 medium borderline
GobtHiC_scaffold_10008860 Steroid CPD/CYP90A1 medium borderline
GobtHiC_scaffold_110048860 Steroid CPD/CYP90A1 medium borderline
GobtHiC_scaffold_130086880 Steroid CPD/CYP90A1 medium borderline
GobtHiC_scaffold_20122700 Steroid CPD/CYP90A1 medium borderline
GobtHiC_scaffold_90300440 Steroid CPD/CYP90A1 low borderline
GobtHiC_scaffold_80251890 Steroid CPI1 high pass
GobtHiC_scaffold_100025490 Steroid CYP51G1 medium borderline
GobtHiC_scaffold_60211290 Steroid CYP51G1 medium borderline
GobtHiC_scaffold_10003780 Steroid CYP90D1 low borderline
GobtHiC_scaffold_120069800 Steroid CYP90D1 low borderline
GobtHiC_scaffold_120077560 Steroid CYP90D1 low borderline
GobtHiC_scaffold_130086730 Steroid CYP90D1 low borderline
GobtHiC_scaffold_50190630 Steroid CYP90D1 low borderline
GobtHiC_scaffold_60199250 Steroid CYP90D1 low borderline
GobtHiC_scaffold_60202220 Steroid CYP90D1 low borderline
GobtHiC_scaffold_70216500 Steroid CYP90D1 low borderline
GobtHiC_scaffold_100023400 Steroid DET2 low borderline
GobtHiC_scaffold_100031850 Steroid DET2 low borderline
GobtHiC_scaffold_10020700 Steroid DET2 medium pass
GobtHiC_scaffold_70217420 Steroid DET2 low borderline
GobtHiC_scaffold_90295880 Steroid DET2 medium pass
GobtHiC_scaffold_90299680 Steroid DET2 low borderline
GobtHiC_scaffold_20119820 Steroid DWF1 medium pass
GobtHiC_scaffold_10002010 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_10002560 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_100032060 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_10010000 Steroid DWF4/CYP90B1 medium borderline
GobtHiC_scaffold_10016270 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_10016340 Steroid DWF4/CYP90B1 medium borderline
GobtHiC_scaffold_110048160 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_110048180 Steroid DWF4/CYP90B1 medium borderline
GobtHiC_scaffold_110048870 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_110049780 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_120072000 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_120072950 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_120074510 Steroid DWF4/CYP90B1 medium pass
GobtHiC_scaffold_120074520 Steroid DWF4/CYP90B1 medium borderline
GobtHiC_scaffold_120074530 Steroid DWF4/CYP90B1 medium borderline
GobtHiC_scaffold_120074540 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_120074860 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_120076630 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_120076650 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_120077550 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_130081880 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_130083810 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_130083960 Steroid DWF4/CYP90B1 medium borderline
GobtHiC_scaffold_20108670 Steroid DWF4/CYP90B1 low borderline
GobtHiC_scaffold_20119840 Steroid DWF4/CYP90B1 low borderline