Grimmia obtusifolia (grimmia_obtusifolia)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 26.81% Terpenoid pathway 24.13% Alkaloid pathway 20.82% Flavonoid pathway 12.62% Rosmarinic acid pathway 9.46% Steroid pathway 6.15%

Family Distribution

634 Candidate Genes

C4H 7.21% C3'H/CYP98A 5.84% BAHD 5.72% POD 5.36% 4CL 5.01% CYP76 4.05% NMT 3.75% IFS 3.34%

Other Families 59.71%

More Families (94)

T3O 41 2.44% STR 41 2.44% DWF4/CYP90B1 41 2.44% F3H 40 2.38% IFR 40 2.38% F3'H/CYP75B 35 2.09% BR6OX2/CYP85A2 34 2.03% PAL 30 1.79% UGT 30 1.79% GS 29 1.73% CODM/T6ODM 28 1.67% 7DLGT 28 1.67% UFGT 28 1.67% PYKS 27 1.61% IO 24 1.43% CYP71 21 1.25% CAD 19 1.13% H6H 18 1.07% SMT1/SMT2/SMT3 18 1.07% CHS 17 1.01% T16H 15 0.89% TRI/TRII 15 0.89% F3'5'H/CYP75A 15 0.89% HCT 15 0.89% LAC 15 0.89% RAS 15 0.89% COMT 14 0.83% G8O/G8H 13 0.77% SLS 13 0.77% CAS 12 0.72% CNMT 11 0.66% CSE 11 0.66% SGD 10 0.6% FNS 10 0.6% 7DLH 9 0.54% 8HGO 9 0.54% CCR 9 0.54% COR 8 0.48% 16OMT 8 0.48% ANR 8 0.48% CYP90D1 8 0.48% NCS 7 0.42% TDC 7 0.42% SQS/FDFT1 7 0.42% PMT 6 0.36% DET2 6 0.36% CPD/CYP90A1 6 0.36% MVK 6 0.36% AACT 6 0.36% CYP80B1 5 0.3% ANS/LDOX 5 0.3% F5H/CYP84A 5 0.3% CPR 5 0.3% BR6OX1/CYP85A1 5 0.3% GGPPS 5 0.3% LAMT 4 0.24% CYP719 4 0.24% BBE 4 0.24% ADC 4 0.24% FLS 4 0.24% TAT 4 0.24% DWF5 4 0.24% SQE 4 0.24% ROT3/CYP90C1 4 0.24% MPO 3 0.18% DFR 3 0.18% CHI 3 0.18% SMO1/SMO2 3 0.18% MVD 3 0.18% 6OMT_4OMT_SOMT 2 0.12% ISY 2 0.12% TYDC_DDC 2 0.12% CCoAOMT 2 0.12% HPPR 2 0.12% CYP51G1 2 0.12% HYD1 2 0.12% FPPS 2 0.12% HDS/IspG 2 0.12% MCT/IspD 2 0.12% DXR 2 0.12% MDS/IspF 2 0.12% HDR/IspH 2 0.12% GES 1 0.06% DWF7 1 0.06% DWF1 1 0.06% CPI1 1 0.06% FK 1 0.06% IDI 1 0.06% CMK/IspE 1 0.06% TPS 1 0.06% DXS 1 0.06% HMGR 1 0.06% PMK 1 0.06% HMGS 1 0.06%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	170	11	POD (85)	View species results
Terpenoid pathway	153	19	BAHD (60)	View species results
Alkaloid pathway	132	16	NMT (22)	View species results
Flavonoid pathway	80	9	UFGT (23)	View species results
Rosmarinic acid pathway	60	7	C4H (19)	View species results
Steroid pathway	39	13	CAS (9)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	643	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	126	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current pathway filter: Terpenoid pathway

Gene	Pathway	Family	Confidence	Status	Best Target
GobtHiC_scaffold_30146960	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
GobtHiC_scaffold_30148690	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
GobtHiC_scaffold_30154330	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
GobtHiC_scaffold_30155260	Terpenoid	BAHD	low	borderline	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
GobtHiC_scaffold_30159260	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
GobtHiC_scaffold_40165370	Terpenoid	BAHD	medium	pass	BAHD__00026__sp_O64811_SCP9_ARATH
GobtHiC_scaffold_40166100	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
GobtHiC_scaffold_40167310	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
GobtHiC_scaffold_40167500	Terpenoid	BAHD	low	borderline	BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
GobtHiC_scaffold_40170110	Terpenoid	BAHD	medium	pass	BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
GobtHiC_scaffold_40174100	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
GobtHiC_scaffold_40178830	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
GobtHiC_scaffold_40179930	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
GobtHiC_scaffold_50182590	Terpenoid	BAHD	medium	pass	BAHD__00053__sp_Q8GXU8_LPAT1_ARATH
GobtHiC_scaffold_50182960	Terpenoid	BAHD	medium	pass	BAHD__00051__sp_Q7XA86_ZDH11_ARATH
GobtHiC_scaffold_50183880	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
GobtHiC_scaffold_50191890	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
GobtHiC_scaffold_50194820	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
GobtHiC_scaffold_50196860	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
GobtHiC_scaffold_60203700	Terpenoid	BAHD	medium	pass	BAHD__00027__sp_O80437_GPAT6_ARATH
GobtHiC_scaffold_60212220	Terpenoid	BAHD	low	borderline	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
GobtHiC_scaffold_70221500	Terpenoid	BAHD	medium	pass	BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
GobtHiC_scaffold_70223070	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
GobtHiC_scaffold_70223250	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
GobtHiC_scaffold_70234570	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
GobtHiC_scaffold_70237620	Terpenoid	BAHD	medium	pass	BAHD__00043__sp_Q52T38_ZDH22_ARATH
GobtHiC_scaffold_70238240	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
GobtHiC_scaffold_70239210	Terpenoid	BAHD	low	borderline	BAHD__00042__sp_Q500Z2_ZDH20_ARATH
GobtHiC_scaffold_70242320	Terpenoid	BAHD	low	borderline	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
GobtHiC_scaffold_70243140	Terpenoid	BAHD	medium	pass	BAHD__00014__sp_B9RK42_GPC1_RICCO
GobtHiC_scaffold_70243510	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
GobtHiC_scaffold_70245320	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
GobtHiC_scaffold_80251170	Terpenoid	BAHD	low	borderline	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
GobtHiC_scaffold_80252590	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
GobtHiC_scaffold_80252960	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
GobtHiC_scaffold_80253390	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
GobtHiC_scaffold_80253420	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
GobtHiC_scaffold_80259680	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
GobtHiC_scaffold_80267420	Terpenoid	BAHD	medium	pass	BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
GobtHiC_scaffold_80275470	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
GobtHiC_scaffold_90277260	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
GobtHiC_scaffold_90283720	Terpenoid	BAHD	low	borderline	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
GobtHiC_scaffold_90285030	Terpenoid	BAHD	medium	pass	BAHD__00030__sp_O80816_GLC_ARATH
GobtHiC_scaffold_90286830	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
GobtHiC_scaffold_90288440	Terpenoid	BAHD	medium	pass	BAHD__00097__sp_Q9ZV87_NAPES_ARATH
GobtHiC_scaffold_90289560	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
GobtHiC_scaffold_90289630	Terpenoid	BAHD	low	borderline	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
GobtHiC_scaffold_90293300	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
GobtHiC_scaffold_90294610	Terpenoid	BAHD	medium	pass	BAHD__00092__sp_Q9SU91_LPXA_ARATH
GobtHiC_scaffold_90297380	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH