PlantSME Plant secondary metabolism enzyme database

Grimmia obtusifolia (grimmia_obtusifolia)

Imported from atlas release summary for Grimmia obtusifolia.

634
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (85) View species results
Terpenoid pathway 153 19 BAHD (60) View species results
Alkaloid pathway 132 16 NMT (22) View species results
Flavonoid pathway 80 9 UFGT (23) View species results
Rosmarinic acid pathway 60 7 C4H (19) View species results
Steroid pathway 39 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 643 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
GobtHiC_scaffold_80256140 Flavonoid F3H medium pass
GobtHiC_scaffold_80257330 Flavonoid F3H medium borderline
GobtHiC_scaffold_80257400 Flavonoid F3H medium borderline
GobtHiC_scaffold_80268230 Flavonoid F3H medium borderline
GobtHiC_scaffold_80269950 Flavonoid F3H medium borderline
GobtHiC_scaffold_90280860 Flavonoid F3H medium borderline
GobtHiC_scaffold_90288000 Flavonoid F3H low borderline
GobtHiC_scaffold_90290680 Flavonoid F3H medium borderline
GobtHiC_scaffold_90297720 Flavonoid F3H medium borderline
GobtHiC_scaffold_90300140 Flavonoid F3H medium pass
GobtHiC_scaffold_100027520 Flavonoid FLS medium borderline
GobtHiC_scaffold_10003140 Flavonoid FLS medium borderline
GobtHiC_scaffold_20119260 Flavonoid FLS low borderline
GobtHiC_scaffold_20127480 Flavonoid FLS low borderline
GobtHiC_scaffold_10002010 Flavonoid FNS medium borderline
GobtHiC_scaffold_100022600 Flavonoid FNS medium borderline
GobtHiC_scaffold_120063310 Flavonoid FNS medium borderline
GobtHiC_scaffold_130081880 Flavonoid FNS medium borderline
GobtHiC_scaffold_30143230 Flavonoid FNS medium borderline
GobtHiC_scaffold_60211290 Flavonoid FNS medium borderline
GobtHiC_scaffold_70238890 Flavonoid FNS medium borderline
GobtHiC_scaffold_80263170 Flavonoid FNS medium borderline
GobtHiC_scaffold_90278730 Flavonoid FNS medium borderline
GobtHiC_scaffold_90291480 Flavonoid FNS low borderline
GobtHiC_scaffold_100021760 Flavonoid IFR medium pass
GobtHiC_scaffold_100023860 Flavonoid IFR low borderline
GobtHiC_scaffold_100034240 Flavonoid IFR low borderline
GobtHiC_scaffold_10012330 Flavonoid IFR low borderline
GobtHiC_scaffold_10012630 Flavonoid IFR medium pass
GobtHiC_scaffold_10012650 Flavonoid IFR medium pass
GobtHiC_scaffold_10012660 Flavonoid IFR medium pass
GobtHiC_scaffold_10012720 Flavonoid IFR medium pass
GobtHiC_scaffold_10012730 Flavonoid IFR high pass
GobtHiC_scaffold_10014650 Flavonoid IFR low borderline
GobtHiC_scaffold_10015440 Flavonoid IFR low borderline
GobtHiC_scaffold_10016670 Flavonoid IFR low borderline
GobtHiC_scaffold_110052670 Flavonoid IFR low borderline
GobtHiC_scaffold_110052760 Flavonoid IFR low borderline
GobtHiC_scaffold_110055320 Flavonoid IFR low borderline
GobtHiC_scaffold_120079140 Flavonoid IFR low borderline
GobtHiC_scaffold_130086330 Flavonoid IFR low borderline
GobtHiC_scaffold_140090730 Flavonoid IFR low borderline
GobtHiC_scaffold_140090750 Flavonoid IFR low borderline
GobtHiC_scaffold_140090820 Flavonoid IFR low borderline
GobtHiC_scaffold_20112260 Flavonoid IFR low borderline
GobtHiC_scaffold_20121100 Flavonoid IFR medium pass
GobtHiC_scaffold_40177950 Flavonoid IFR low borderline
GobtHiC_scaffold_40179150 Flavonoid IFR low borderline
GobtHiC_scaffold_50187680 Flavonoid IFR low borderline
GobtHiC_scaffold_60198470 Flavonoid IFR low borderline