PlantSME Plant secondary metabolism enzyme database

Grimmia obtusifolia (grimmia_obtusifolia)

Imported from atlas release summary for Grimmia obtusifolia.

634
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (85) View species results
Terpenoid pathway 153 19 BAHD (60) View species results
Alkaloid pathway 132 16 NMT (22) View species results
Flavonoid pathway 80 9 UFGT (23) View species results
Rosmarinic acid pathway 60 7 C4H (19) View species results
Steroid pathway 39 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 643 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
GobtHiC_scaffold_40175400 Phenylpropanoid CAD low borderline
GobtHiC_scaffold_40179990 Phenylpropanoid CAD low borderline
GobtHiC_scaffold_50194710 Phenylpropanoid CAD low borderline
GobtHiC_scaffold_60207440 Phenylpropanoid CAD low borderline
GobtHiC_scaffold_80263960 Phenylpropanoid CAD medium pass
GobtHiC_scaffold_80265240 Phenylpropanoid CAD low borderline
GobtHiC_scaffold_80267300 Phenylpropanoid CAD medium pass
GobtHiC_scaffold_80268210 Phenylpropanoid CAD low borderline
GobtHiC_scaffold_90297200 Phenylpropanoid CAD medium borderline
GobtHiC_scaffold_100023860 Phenylpropanoid CCR low borderline
GobtHiC_scaffold_130087550 Phenylpropanoid CCR medium borderline
GobtHiC_scaffold_20111830 Phenylpropanoid CCR medium borderline
GobtHiC_scaffold_20121100 Phenylpropanoid CCR low borderline
GobtHiC_scaffold_40179150 Phenylpropanoid CCR low borderline
GobtHiC_scaffold_50194280 Phenylpropanoid CCR medium borderline
GobtHiC_scaffold_60209360 Phenylpropanoid CCR medium borderline
GobtHiC_scaffold_8410276810 Phenylpropanoid CCR low borderline
GobtHiC_scaffold_90294660 Phenylpropanoid CCR low borderline
GobtHiC_scaffold_30141210 Phenylpropanoid CCoAOMT medium pass
GobtHiC_scaffold_60210580 Phenylpropanoid CCoAOMT medium pass
GobtHiC_scaffold_100023950 Phenylpropanoid COMT medium pass
GobtHiC_scaffold_100037170 Phenylpropanoid COMT medium pass
GobtHiC_scaffold_100037190 Phenylpropanoid COMT medium pass
GobtHiC_scaffold_120065750 Phenylpropanoid COMT medium pass
GobtHiC_scaffold_120071930 Phenylpropanoid COMT medium pass
GobtHiC_scaffold_120071940 Phenylpropanoid COMT medium pass
GobtHiC_scaffold_130082920 Phenylpropanoid COMT low borderline
GobtHiC_scaffold_130082930 Phenylpropanoid COMT medium pass
GobtHiC_scaffold_130082940 Phenylpropanoid COMT medium pass
GobtHiC_scaffold_130082970 Phenylpropanoid COMT medium pass
GobtHiC_scaffold_30143840 Phenylpropanoid COMT low borderline
GobtHiC_scaffold_70225890 Phenylpropanoid COMT medium pass
GobtHiC_scaffold_80251740 Phenylpropanoid COMT medium pass
GobtHiC_scaffold_80251930 Phenylpropanoid COMT low borderline
GobtHiC_scaffold_10003230 Phenylpropanoid CSE medium pass
GobtHiC_scaffold_100033050 Phenylpropanoid CSE low borderline
GobtHiC_scaffold_110045200 Phenylpropanoid CSE medium pass
GobtHiC_scaffold_110045210 Phenylpropanoid CSE medium pass
GobtHiC_scaffold_110052870 Phenylpropanoid CSE medium pass
GobtHiC_scaffold_120067550 Phenylpropanoid CSE medium pass
GobtHiC_scaffold_30157220 Phenylpropanoid CSE medium pass
GobtHiC_scaffold_40167830 Phenylpropanoid CSE medium pass
GobtHiC_scaffold_40173490 Phenylpropanoid CSE medium pass
GobtHiC_scaffold_60200940 Phenylpropanoid CSE medium pass
GobtHiC_scaffold_60213200 Phenylpropanoid CSE medium pass
GobtHiC_scaffold_110048880 Phenylpropanoid F5H/CYP84A medium borderline
GobtHiC_scaffold_120063310 Phenylpropanoid F5H/CYP84A medium borderline
GobtHiC_scaffold_20108660 Phenylpropanoid F5H/CYP84A medium borderline
GobtHiC_scaffold_40177310 Phenylpropanoid F5H/CYP84A medium borderline
GobtHiC_scaffold_60211290 Phenylpropanoid F5H/CYP84A medium borderline