PlantSME Plant secondary metabolism enzyme database

Grimmia obtusifolia (grimmia_obtusifolia)

Imported from atlas release summary for Grimmia obtusifolia.

634
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (85) View species results
Terpenoid pathway 153 19 BAHD (60) View species results
Alkaloid pathway 132 16 NMT (22) View species results
Flavonoid pathway 80 9 UFGT (23) View species results
Rosmarinic acid pathway 60 7 C4H (19) View species results
Steroid pathway 39 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 643 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
GobtHiC_scaffold_40174940 Alkaloid NMT medium borderline
GobtHiC_scaffold_40177800 Alkaloid NMT medium pass
GobtHiC_scaffold_40179970 Alkaloid NMT medium pass
GobtHiC_scaffold_50183830 Alkaloid NMT low borderline
GobtHiC_scaffold_50187770 Alkaloid NMT medium pass
GobtHiC_scaffold_50190880 Alkaloid NMT medium pass
GobtHiC_scaffold_50196110 Alkaloid NMT low borderline
GobtHiC_scaffold_60208020 Alkaloid NMT low borderline
GobtHiC_scaffold_60208410 Alkaloid NMT medium pass
GobtHiC_scaffold_60208950 Alkaloid NMT low borderline
GobtHiC_scaffold_60211970 Alkaloid NMT low borderline
GobtHiC_scaffold_60212100 Alkaloid NMT medium pass
GobtHiC_scaffold_60212120 Alkaloid NMT medium pass
GobtHiC_scaffold_60212130 Alkaloid NMT low borderline
GobtHiC_scaffold_70217090 Alkaloid NMT low borderline
GobtHiC_scaffold_70217220 Alkaloid NMT medium pass
GobtHiC_scaffold_70225890 Alkaloid NMT medium borderline
GobtHiC_scaffold_70235290 Alkaloid NMT medium pass
GobtHiC_scaffold_70236650 Alkaloid NMT low borderline
GobtHiC_scaffold_70239360 Alkaloid NMT low borderline
GobtHiC_scaffold_70241200 Alkaloid NMT medium borderline
GobtHiC_scaffold_70243010 Alkaloid NMT low borderline
GobtHiC_scaffold_80251930 Alkaloid NMT medium pass
GobtHiC_scaffold_80253040 Alkaloid NMT low borderline
GobtHiC_scaffold_80254840 Alkaloid NMT low borderline
GobtHiC_scaffold_80255070 Alkaloid NMT low borderline
GobtHiC_scaffold_80257000 Alkaloid NMT medium borderline
GobtHiC_scaffold_80263970 Alkaloid NMT medium pass
GobtHiC_scaffold_80266110 Alkaloid NMT medium borderline
GobtHiC_scaffold_8370276660 Alkaloid NMT medium pass
GobtHiC_scaffold_8370276680 Alkaloid NMT medium pass
GobtHiC_scaffold_90280160 Alkaloid NMT medium pass
GobtHiC_scaffold_90282560 Alkaloid NMT low borderline
GobtHiC_scaffold_90295690 Alkaloid NMT medium borderline
GobtHiC_scaffold_100037730 Alkaloid PMT medium pass
GobtHiC_scaffold_10013820 Alkaloid PMT low borderline
GobtHiC_scaffold_140093070 Alkaloid PMT low borderline
GobtHiC_scaffold_80252490 Alkaloid PMT medium borderline
GobtHiC_scaffold_80259680 Alkaloid PMT medium pass
GobtHiC_scaffold_90289600 Alkaloid PMT medium pass
GobtHiC_scaffold_10005390 Alkaloid PYKS low borderline
GobtHiC_scaffold_10013140 Alkaloid PYKS medium pass
GobtHiC_scaffold_10016510 Alkaloid PYKS low borderline
GobtHiC_scaffold_10016810 Alkaloid PYKS low borderline
GobtHiC_scaffold_110054500 Alkaloid PYKS high pass
GobtHiC_scaffold_110054510 Alkaloid PYKS high pass
GobtHiC_scaffold_110055630 Alkaloid PYKS medium pass
GobtHiC_scaffold_120076610 Alkaloid PYKS high pass
GobtHiC_scaffold_120078010 Alkaloid PYKS medium pass
GobtHiC_scaffold_30133970 Alkaloid PYKS high pass