PlantSME Plant secondary metabolism enzyme database

Juglans nigra (juglans_nigra)

Imported from atlas release summary for Juglans nigra.

1793
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 494 19 BAHD (179) View species results
Phenylpropanoid pathway 393 11 POD (147) View species results
Alkaloid pathway 383 23 7DLGT (71) View species results
Flavonoid pathway 245 10 UFGT (152) View species results
Rosmarinic acid pathway 166 7 C4H (68) View species results
Steroid pathway 112 12 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1742 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Jnigscaffold20260062620.2 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold20580064250.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold20580064320.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold21510067370.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold23110073390.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold2330075180.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold24130080370.2 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold24690083040.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold25460087070.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold25870088210.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold25880088640.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold25880088900.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold2660092530.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold27220096000.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold27220096270.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold280103420.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold28850106200.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold30960117040.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold31100117720.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold3210122570.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold32280122960.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold330125880.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold33710128800.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold33930129410.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold34530131500.2 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold37710142830.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold41160153120.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold41880156640.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold45530167140.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold45580167340.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold46780171030.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold47420173200.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold47420173240.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold48980179070.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold49520180010.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold49880181130.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold52590187130.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold53860191500.2 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold5400192270.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold56070198060.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold60700209210.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold62290212390.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold64460217460.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold65380220130.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold68720226670.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold72160236880.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold73440241130.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold77180249740.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold7750250480.1 Steroid BR6OX2/CYP85A2 low borderline
Jnigscaffold78110251850.1 Steroid BR6OX2/CYP85A2 low borderline