PlantSME Plant secondary metabolism enzyme database

Juglans nigra (juglans_nigra)

Imported from atlas release summary for Juglans nigra.

2125
Candidate Protein Records
1793
Pathway-Level Records
4519
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 494 19 BAHD (179) View species results
Phenylpropanoid pathway 393 11 POD (147) View species results
Alkaloid pathway 383 23 7DLGT (71) View species results
Flavonoid pathway 245 10 UFGT (152) View species results
Rosmarinic acid pathway 166 7 C4H (68) View species results
Steroid pathway 112 12 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1742 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Jnigscaffold24580082200.1 Alkaloid BBE medium borderline
Jnigscaffold2970110550.1 Alkaloid BBE medium borderline
Jnigscaffold30450114380.1 Alkaloid BBE medium borderline
Jnigscaffold30910116300.1 Alkaloid BBE medium borderline
Jnigscaffold30920116810.1 Alkaloid BBE low borderline
Jnigscaffold31100118250.1 Alkaloid BBE medium borderline
Jnigscaffold31450120290.1 Alkaloid BBE medium borderline
Jnigscaffold31460120310.1 Alkaloid BBE medium borderline
Jnigscaffold32640124540.1 Alkaloid BBE medium borderline
Jnigscaffold34340130780.1 Alkaloid BBE medium borderline
Jnigscaffold34340130800.1 Alkaloid BBE medium borderline
Jnigscaffold34340130810.1 Alkaloid BBE medium borderline
Jnigscaffold34360130850.1 Alkaloid BBE medium borderline
Jnigscaffold35350134100.1 Alkaloid BBE low borderline
Jnigscaffold36580138600.2 Alkaloid BBE medium borderline
Jnigscaffold37740143120.1 Alkaloid BBE medium borderline
Jnigscaffold44940165150.1 Alkaloid BBE medium borderline
Jnigscaffold45410166800.1 Alkaloid BBE medium borderline
Jnigscaffold45800168100.1 Alkaloid BBE medium borderline
Jnigscaffold45800168160.1 Alkaloid BBE medium borderline
Jnigscaffold4810175820.1 Alkaloid BBE medium borderline
Jnigscaffold56580199430.1 Alkaloid BBE medium borderline
Jnigscaffold64910217990.1 Alkaloid BBE low borderline
Jnigscaffold68280225770.3 Alkaloid BBE medium borderline
Jnigscaffold6840226150.1 Alkaloid BBE medium borderline
Jnigscaffold72160236950.1 Alkaloid BBE medium borderline
Jnigscaffold79500253950.1 Alkaloid BBE medium borderline
Jnigscaffold80050255470.1 Alkaloid BBE medium borderline
Jnigscaffold87680269250.1 Alkaloid BBE medium borderline
Jnigscaffold87860269520.1 Alkaloid BBE medium borderline
Jnigscaffold15380043340.1 Alkaloid CNMT low borderline
Jnigscaffold29350108300.1 Alkaloid CNMT medium pass
Jnigscaffold34410131220.1 Alkaloid CNMT low borderline
Jnigscaffold40320150380.3 Alkaloid CNMT low borderline
Jnigscaffold42320158470.1 Alkaloid CNMT low borderline
Jnigscaffold48880178680.1 Alkaloid CNMT low borderline
Jnigscaffold53940191950.1 Alkaloid CNMT low borderline
Jnigscaffold60010208050.1 Alkaloid CNMT medium pass
Jnigscaffold6840226180.1 Alkaloid CNMT medium pass
Jnigscaffold69160228750.1 Alkaloid CNMT low borderline
Jnigscaffold72570238680.1 Alkaloid CNMT medium pass
Jnigscaffold7930253470.1 Alkaloid CNMT medium borderline
Jnigscaffold8320260950.1 Alkaloid CNMT low borderline
Jnigscaffold8490264260.1 Alkaloid CNMT medium pass
JnigC5384270004390.1 Alkaloid CODM/T6ODM medium borderline
JnigC5404550006520.1 Alkaloid CODM/T6ODM medium borderline
JnigC5404970006610.1 Alkaloid CODM/T6ODM medium borderline
JnigC5438510013570.1 Alkaloid CODM/T6ODM medium borderline
JnigC5439790013750.1 Alkaloid CODM/T6ODM medium borderline
JnigC5441690014790.1 Alkaloid CODM/T6ODM medium borderline