PlantSME Plant secondary metabolism enzyme database

Juglans nigra (juglans_nigra)

Imported from atlas release summary for Juglans nigra.

1793
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 494 19 BAHD (179) View species results
Phenylpropanoid pathway 393 11 POD (147) View species results
Alkaloid pathway 383 23 7DLGT (71) View species results
Flavonoid pathway 245 10 UFGT (152) View species results
Rosmarinic acid pathway 166 7 C4H (68) View species results
Steroid pathway 112 12 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1742 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Jnigscaffold30000113210.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold30910116340.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold30970117130.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold31380119970.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold32660124610.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold32930125770.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold34760132380.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold34760132770.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold34950133300.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold36400137550.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold36870140070.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold37190141120.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold3940147570.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold41050152440.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold41050152660.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold41300153920.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold42970160090.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold43900162340.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold45680167580.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold49220179380.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold49220179390.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold5240186150.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold52480186870.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold5400192360.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold5400192400.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold5400192410.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold55120195240.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold56590199450.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold5660199520.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold5680200140.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold5900206220.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold59050206420.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold5950207310.1 Steroid DWF4/CYP90B1 medium borderline
Jnigscaffold60960209820.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold61550210730.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold61920211830.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold64310217240.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold65010218490.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold65080219080.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold65210219700.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold65210219810.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold6580220940.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold66480222850.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold66740223470.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold72640238770.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold73420240400.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold74970244300.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold76200248120.2 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold77840251140.1 Steroid DWF4/CYP90B1 low borderline
Jnigscaffold78550252460.1 Steroid DWF4/CYP90B1 low borderline