Leucobryum bowringii (leucobryum_bowringii)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 26.51% Terpenoid pathway 22.33% Alkaloid pathway 20.32% Flavonoid pathway 12.68% Rosmarinic acid pathway 11.53% Steroid pathway 6.63%

Family Distribution

694 Candidate Genes

C4H 7.52% C3'H/CYP98A 6.86% CYP76 5.81% BAHD 4.71% 4CL 4.56% POD 4.21% IFS 4.11% NMT 3.46%

Other Families 58.77%

More Families (95)

BR6OX2/CYP85A2 59 2.96% DWF4/CYP90B1 52 2.61% T3O 51 2.56% STR 45 2.25% PAL 45 2.25% IO 44 2.2% F3H 43 2.15% IFR 40 2.0% F3'H/CYP75B 39 1.95% CODM/T6ODM 34 1.7% PYKS 31 1.55% GS 30 1.5% UGT 30 1.5% UFGT 29 1.45% 7DLGT 27 1.35% SMT1/SMT2/SMT3 24 1.2% LAC 23 1.15% COMT 22 1.1% G8O/G8H 21 1.05% T16H 21 1.05% CHS 20 1.0% F3'5'H/CYP75A 20 1.0% CAD 19 0.95% CAS 18 0.9% TRI/TRII 17 0.85% CSE 16 0.8% CYP71 15 0.75% SGD 14 0.7% SLS 13 0.65% 16OMT 13 0.65% FNS 13 0.65% CNMT 12 0.6% LAMT 12 0.6% H6H 12 0.6% HCT 11 0.55% RAS 11 0.55% CPD/CYP90A1 9 0.45% 8HGO 8 0.4% COR 8 0.4% NCS 8 0.4% CYP51G1 8 0.4% SQS/FDFT1 8 0.4% AACT 8 0.4% 7DLH 7 0.35% CYP80B1 7 0.35% ANR 7 0.35% DET2 7 0.35% F5H/CYP84A 6 0.3% BR6OX1/CYP85A1 6 0.3% CYP90D1 6 0.3% BBE 5 0.25% PMT 5 0.25% TDC 5 0.25% CCR 5 0.25% TAT 5 0.25% ROT3/CYP90C1 5 0.25% DWF5 5 0.25% FPPS 5 0.25% MVK 5 0.25% CYP719 4 0.2% MPO 4 0.2% DFR 4 0.2% CHI 4 0.2% ANS/LDOX 4 0.2% CPR 4 0.2% TPS 4 0.2% GGPPS 4 0.2% GES 3 0.15% ISY 3 0.15% 6OMT_4OMT_SOMT 3 0.15% ADC 3 0.15% HPPR 3 0.15% SQE 3 0.15% CCoAOMT 2 0.1% SMO1/SMO2 2 0.1% MCT/IspD 2 0.1% MVD 2 0.1% HMGS 2 0.1% HDS/IspG 2 0.1% DXS 2 0.1% TYDC_DDC 1 0.05% FLS 1 0.05% HYD1 1 0.05% DWF1 1 0.05% FK 1 0.05% CPI1 1 0.05% DWF7 1 0.05% MDS/IspF 1 0.05% PMK 1 0.05% DXR 1 0.05% CMK/IspE 1 0.05% GPPS 1 0.05% IDI 1 0.05% HDR/IspH 1 0.05% HMGR 1 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	184	10	POD (78)	View species results
Terpenoid pathway	155	19	BAHD (59)	View species results
Alkaloid pathway	141	17	NMT (27)	View species results
Flavonoid pathway	88	10	UFGT (25)	View species results
Rosmarinic acid pathway	80	7	C4H (38)	View species results
Steroid pathway	46	12	CAS (16)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	878	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	116	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: C3'H/CYP98A

Gene	Pathway	Family	Confidence	Status
Lbowcontig_60301710	Phenylpropanoid	C3'H/CYP98A	high	pass
Lbowcontig_60305120	Phenylpropanoid	C3'H/CYP98A	medium	pass
Lbowcontig_60305280	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_60310790	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_60312090	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_60312120	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_60312630	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_60315430	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_60316560	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_60318260	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_60318960	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_60319770	Phenylpropanoid	C3'H/CYP98A	medium	pass
Lbowcontig_60322460	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_60323570	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_80324380	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_80324850	Phenylpropanoid	C3'H/CYP98A	medium	pass
Lbowcontig_80325310	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_80325890	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_80327660	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_80328650	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_80330780	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_80330810	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_80333110	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_80340760	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_80342570	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_80343330	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_80343920	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_80344110	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_80344650	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_90346530	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_90347230	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_90347240	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_90349770	Phenylpropanoid	C3'H/CYP98A	low	borderline
Lbowcontig_90362230	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_90362250	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_90369520	Phenylpropanoid	C3'H/CYP98A	medium	borderline
Lbowcontig_90369920	Phenylpropanoid	C3'H/CYP98A	medium	borderline