PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Lbowcontig_100033490 Flavonoid C4H low borderline
Lbowcontig_10015930 Flavonoid C4H medium borderline
Lbowcontig_120066550 Flavonoid C4H low borderline
Lbowcontig_160125640 Flavonoid C4H medium borderline
Lbowcontig_160132040 Flavonoid C4H medium borderline
Lbowcontig_200210150 Flavonoid C4H medium borderline
Lbowcontig_40244170 Flavonoid C4H medium borderline
Lbowcontig_80344650 Flavonoid C4H medium borderline
Lbowcontig_90369440 Flavonoid C4H low borderline
Lbowcontig_100019570 Rosmarinic Acid C4H low borderline
Lbowcontig_100019590 Rosmarinic Acid C4H low borderline
Lbowcontig_100020220 Rosmarinic Acid C4H medium pass
Lbowcontig_100023130 Rosmarinic Acid C4H low borderline
Lbowcontig_100024640 Rosmarinic Acid C4H low borderline
Lbowcontig_100025220 Rosmarinic Acid C4H low borderline
Lbowcontig_100027220 Rosmarinic Acid C4H low borderline
Lbowcontig_100027830 Rosmarinic Acid C4H low borderline
Lbowcontig_100029410 Rosmarinic Acid C4H low borderline
Lbowcontig_100031040 Rosmarinic Acid C4H medium pass
Lbowcontig_100033480 Rosmarinic Acid C4H low borderline
Lbowcontig_100033490 Rosmarinic Acid C4H low borderline
Lbowcontig_100037250 Rosmarinic Acid C4H medium pass
Lbowcontig_10003990 Rosmarinic Acid C4H medium pass
Lbowcontig_10009100 Rosmarinic Acid C4H medium pass
Lbowcontig_10015290 Rosmarinic Acid C4H low borderline
Lbowcontig_10015930 Rosmarinic Acid C4H medium pass
Lbowcontig_10016140 Rosmarinic Acid C4H low borderline
Lbowcontig_120054700 Rosmarinic Acid C4H medium pass
Lbowcontig_120062750 Rosmarinic Acid C4H low borderline
Lbowcontig_120065090 Rosmarinic Acid C4H low borderline
Lbowcontig_120065630 Rosmarinic Acid C4H low borderline
Lbowcontig_120065950 Rosmarinic Acid C4H low borderline
Lbowcontig_120065980 Rosmarinic Acid C4H low borderline
Lbowcontig_120066550 Rosmarinic Acid C4H low borderline
Lbowcontig_120068290 Rosmarinic Acid C4H medium pass
Lbowcontig_120068300 Rosmarinic Acid C4H low borderline
Lbowcontig_120068310 Rosmarinic Acid C4H low borderline
Lbowcontig_120069070 Rosmarinic Acid C4H low borderline
Lbowcontig_120069130 Rosmarinic Acid C4H low borderline
Lbowcontig_120069180 Rosmarinic Acid C4H low borderline
Lbowcontig_120069580 Rosmarinic Acid C4H low borderline
Lbowcontig_120069680 Rosmarinic Acid C4H medium pass
Lbowcontig_120069710 Rosmarinic Acid C4H low borderline
Lbowcontig_120077130 Rosmarinic Acid C4H medium pass
Lbowcontig_120077400 Rosmarinic Acid C4H medium pass
Lbowcontig_120077520 Rosmarinic Acid C4H low borderline
Lbowcontig_120078190 Rosmarinic Acid C4H low borderline
Lbowcontig_120080600 Rosmarinic Acid C4H low borderline
Lbowcontig_120080810 Rosmarinic Acid C4H low borderline
Lbowcontig_120081500 Rosmarinic Acid C4H low borderline