PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Lbowcontig_120084010 Rosmarinic Acid C4H medium pass
Lbowcontig_120084030 Rosmarinic Acid C4H medium pass
Lbowcontig_120084690 Rosmarinic Acid C4H low borderline
Lbowcontig_120086820 Rosmarinic Acid C4H low borderline
Lbowcontig_120088190 Rosmarinic Acid C4H low borderline
Lbowcontig_140096470 Rosmarinic Acid C4H low borderline
Lbowcontig_150105530 Rosmarinic Acid C4H low borderline
Lbowcontig_150105550 Rosmarinic Acid C4H low borderline
Lbowcontig_160119090 Rosmarinic Acid C4H low borderline
Lbowcontig_160123260 Rosmarinic Acid C4H low borderline
Lbowcontig_160125640 Rosmarinic Acid C4H medium pass
Lbowcontig_160132040 Rosmarinic Acid C4H medium pass
Lbowcontig_160134100 Rosmarinic Acid C4H medium pass
Lbowcontig_160138130 Rosmarinic Acid C4H medium pass
Lbowcontig_160138240 Rosmarinic Acid C4H medium pass
Lbowcontig_160139000 Rosmarinic Acid C4H low borderline
Lbowcontig_190152480 Rosmarinic Acid C4H low borderline
Lbowcontig_190152790 Rosmarinic Acid C4H low borderline
Lbowcontig_190155570 Rosmarinic Acid C4H low borderline
Lbowcontig_190156110 Rosmarinic Acid C4H low borderline
Lbowcontig_200180930 Rosmarinic Acid C4H low borderline
Lbowcontig_200182480 Rosmarinic Acid C4H low borderline
Lbowcontig_200196810 Rosmarinic Acid C4H medium pass
Lbowcontig_200197050 Rosmarinic Acid C4H low borderline
Lbowcontig_200197550 Rosmarinic Acid C4H low borderline
Lbowcontig_200199390 Rosmarinic Acid C4H medium pass
Lbowcontig_200210150 Rosmarinic Acid C4H medium pass
Lbowcontig_220214270 Rosmarinic Acid C4H low borderline
Lbowcontig_220217570 Rosmarinic Acid C4H low borderline
Lbowcontig_220218790 Rosmarinic Acid C4H low borderline
Lbowcontig_220218880 Rosmarinic Acid C4H low borderline
Lbowcontig_30221610 Rosmarinic Acid C4H low borderline
Lbowcontig_40242390 Rosmarinic Acid C4H medium pass
Lbowcontig_40244170 Rosmarinic Acid C4H medium pass
Lbowcontig_40246080 Rosmarinic Acid C4H low borderline
Lbowcontig_40249040 Rosmarinic Acid C4H low borderline
Lbowcontig_40252870 Rosmarinic Acid C4H low borderline
Lbowcontig_40254640 Rosmarinic Acid C4H low borderline
Lbowcontig_40256060 Rosmarinic Acid C4H low borderline
Lbowcontig_50262130 Rosmarinic Acid C4H low borderline
Lbowcontig_50264580 Rosmarinic Acid C4H low borderline
Lbowcontig_50268790 Rosmarinic Acid C4H medium pass
Lbowcontig_50274110 Rosmarinic Acid C4H low borderline
Lbowcontig_50275340 Rosmarinic Acid C4H medium pass
Lbowcontig_50281860 Rosmarinic Acid C4H medium pass
Lbowcontig_50282940 Rosmarinic Acid C4H low borderline
Lbowcontig_50285340 Rosmarinic Acid C4H low borderline
Lbowcontig_60292950 Rosmarinic Acid C4H low borderline
Lbowcontig_60293180 Rosmarinic Acid C4H medium pass
Lbowcontig_60298530 Rosmarinic Acid C4H low borderline