PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Lbowcontig_60298590 Rosmarinic Acid C4H low borderline
Lbowcontig_60301630 Rosmarinic Acid C4H medium pass
Lbowcontig_60301650 Rosmarinic Acid C4H medium pass
Lbowcontig_60301660 Rosmarinic Acid C4H low borderline
Lbowcontig_60301670 Rosmarinic Acid C4H medium pass
Lbowcontig_60301710 Rosmarinic Acid C4H low borderline
Lbowcontig_60305120 Rosmarinic Acid C4H low borderline
Lbowcontig_60305280 Rosmarinic Acid C4H low borderline
Lbowcontig_60310790 Rosmarinic Acid C4H low borderline
Lbowcontig_60312090 Rosmarinic Acid C4H medium pass
Lbowcontig_60312110 Rosmarinic Acid C4H low borderline
Lbowcontig_60312120 Rosmarinic Acid C4H medium pass
Lbowcontig_60312630 Rosmarinic Acid C4H low borderline
Lbowcontig_60315430 Rosmarinic Acid C4H low borderline
Lbowcontig_60315720 Rosmarinic Acid C4H low borderline
Lbowcontig_60318260 Rosmarinic Acid C4H low borderline
Lbowcontig_60318960 Rosmarinic Acid C4H medium pass
Lbowcontig_60322460 Rosmarinic Acid C4H low borderline
Lbowcontig_60323570 Rosmarinic Acid C4H low borderline
Lbowcontig_80324380 Rosmarinic Acid C4H low borderline
Lbowcontig_80324850 Rosmarinic Acid C4H low borderline
Lbowcontig_80325310 Rosmarinic Acid C4H medium pass
Lbowcontig_80327660 Rosmarinic Acid C4H low borderline
Lbowcontig_80328650 Rosmarinic Acid C4H low borderline
Lbowcontig_80330810 Rosmarinic Acid C4H low borderline
Lbowcontig_80333110 Rosmarinic Acid C4H low borderline
Lbowcontig_80340760 Rosmarinic Acid C4H low borderline
Lbowcontig_80342570 Rosmarinic Acid C4H low borderline
Lbowcontig_80343330 Rosmarinic Acid C4H low borderline
Lbowcontig_80343920 Rosmarinic Acid C4H medium pass
Lbowcontig_80344110 Rosmarinic Acid C4H low borderline
Lbowcontig_80344650 Rosmarinic Acid C4H low borderline
Lbowcontig_90346530 Rosmarinic Acid C4H low borderline
Lbowcontig_90347230 Rosmarinic Acid C4H low borderline
Lbowcontig_90349770 Rosmarinic Acid C4H low borderline
Lbowcontig_90362230 Rosmarinic Acid C4H medium pass
Lbowcontig_90362250 Rosmarinic Acid C4H medium pass
Lbowcontig_90369440 Rosmarinic Acid C4H low borderline
Lbowcontig_90369520 Rosmarinic Acid C4H medium pass
Lbowcontig_90369920 Rosmarinic Acid C4H low borderline