PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Lbowcontig_100025120 Phenylpropanoid 4CL low borderline
Lbowcontig_100030800 Phenylpropanoid 4CL medium pass
Lbowcontig_110045100 Phenylpropanoid 4CL low borderline
Lbowcontig_120067410 Phenylpropanoid 4CL medium pass
Lbowcontig_120072830 Phenylpropanoid 4CL low borderline
Lbowcontig_120076130 Phenylpropanoid 4CL medium pass
Lbowcontig_120084880 Phenylpropanoid 4CL low borderline
Lbowcontig_120086070 Phenylpropanoid 4CL low borderline
Lbowcontig_120087180 Phenylpropanoid 4CL medium pass
Lbowcontig_150104220 Phenylpropanoid 4CL low borderline
Lbowcontig_150108100 Phenylpropanoid 4CL medium pass
Lbowcontig_160122160 Phenylpropanoid 4CL low borderline
Lbowcontig_160135210 Phenylpropanoid 4CL low borderline
Lbowcontig_160140790 Phenylpropanoid 4CL medium pass
Lbowcontig_160144670 Phenylpropanoid 4CL medium pass
Lbowcontig_170151310 Phenylpropanoid 4CL low borderline
Lbowcontig_40233010 Phenylpropanoid 4CL low borderline
Lbowcontig_40234070 Phenylpropanoid 4CL medium pass
Lbowcontig_40241430 Phenylpropanoid 4CL medium pass
Lbowcontig_40246720 Phenylpropanoid 4CL low borderline
Lbowcontig_50264910 Phenylpropanoid 4CL low borderline
Lbowcontig_50271770 Phenylpropanoid 4CL medium pass
Lbowcontig_50276870 Phenylpropanoid 4CL medium pass
Lbowcontig_50280230 Phenylpropanoid 4CL low borderline
Lbowcontig_60292660 Phenylpropanoid 4CL low borderline
Lbowcontig_60298080 Phenylpropanoid 4CL low borderline
Lbowcontig_60303610 Phenylpropanoid 4CL medium pass
Lbowcontig_80336220 Phenylpropanoid 4CL low borderline
Lbowcontig_90356560 Phenylpropanoid 4CL medium pass
Lbowcontig_90369210 Phenylpropanoid 4CL low borderline
Lbowcontig_100019570 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_100019590 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_100020220 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_100023130 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_100024640 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_100025220 Phenylpropanoid C3'H/CYP98A low borderline
Lbowcontig_100027830 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_100031040 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_100033480 Phenylpropanoid C3'H/CYP98A high pass
Lbowcontig_100037250 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_10003990 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_10009100 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_10015290 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_10015930 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_10016140 Phenylpropanoid C3'H/CYP98A low borderline
Lbowcontig_110044690 Phenylpropanoid C3'H/CYP98A low borderline
Lbowcontig_120054700 Phenylpropanoid C3'H/CYP98A medium borderline
Lbowcontig_120062750 Phenylpropanoid C3'H/CYP98A high pass
Lbowcontig_120065090 Phenylpropanoid C3'H/CYP98A low borderline
Lbowcontig_120065630 Phenylpropanoid C3'H/CYP98A low borderline