PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

998
Candidate Protein Records
694
Pathway-Level Records
1996
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lbowcontig_100025120 Rosmarinic Acid 4CL low borderline
Lbowcontig_100030800 Rosmarinic Acid 4CL medium pass
Lbowcontig_110045100 Rosmarinic Acid 4CL low borderline
Lbowcontig_120067410 Rosmarinic Acid 4CL medium pass
Lbowcontig_120072830 Rosmarinic Acid 4CL low borderline
Lbowcontig_120076130 Rosmarinic Acid 4CL medium pass
Lbowcontig_120084880 Rosmarinic Acid 4CL low borderline
Lbowcontig_120086070 Rosmarinic Acid 4CL low borderline
Lbowcontig_120087180 Rosmarinic Acid 4CL medium pass
Lbowcontig_150104220 Rosmarinic Acid 4CL low borderline
Lbowcontig_150108100 Rosmarinic Acid 4CL medium pass
Lbowcontig_160122160 Rosmarinic Acid 4CL low borderline
Lbowcontig_160135210 Rosmarinic Acid 4CL low borderline
Lbowcontig_160140790 Rosmarinic Acid 4CL medium pass
Lbowcontig_160144670 Rosmarinic Acid 4CL medium pass
Lbowcontig_160146130 Rosmarinic Acid 4CL low borderline
Lbowcontig_170151310 Rosmarinic Acid 4CL low borderline
Lbowcontig_40233010 Rosmarinic Acid 4CL low borderline
Lbowcontig_40234070 Rosmarinic Acid 4CL medium pass
Lbowcontig_40241430 Rosmarinic Acid 4CL medium pass
Lbowcontig_40246720 Rosmarinic Acid 4CL low borderline
Lbowcontig_50264910 Rosmarinic Acid 4CL low borderline
Lbowcontig_50271770 Rosmarinic Acid 4CL medium pass
Lbowcontig_50276870 Rosmarinic Acid 4CL medium pass
Lbowcontig_50280230 Rosmarinic Acid 4CL low borderline
Lbowcontig_60292660 Rosmarinic Acid 4CL low borderline
Lbowcontig_60298080 Rosmarinic Acid 4CL low borderline
Lbowcontig_60303610 Rosmarinic Acid 4CL medium pass
Lbowcontig_80336220 Rosmarinic Acid 4CL low borderline
Lbowcontig_90356560 Rosmarinic Acid 4CL medium pass
Lbowcontig_90369210 Rosmarinic Acid 4CL low borderline
Lbowcontig_100019570 Rosmarinic Acid C4H low borderline
Lbowcontig_100019590 Rosmarinic Acid C4H low borderline
Lbowcontig_100020220 Rosmarinic Acid C4H medium pass
Lbowcontig_100023130 Rosmarinic Acid C4H low borderline
Lbowcontig_100024640 Rosmarinic Acid C4H low borderline
Lbowcontig_100025220 Rosmarinic Acid C4H low borderline
Lbowcontig_100027220 Rosmarinic Acid C4H low borderline
Lbowcontig_100027830 Rosmarinic Acid C4H low borderline
Lbowcontig_100029410 Rosmarinic Acid C4H low borderline
Lbowcontig_100031040 Rosmarinic Acid C4H medium pass
Lbowcontig_100033480 Rosmarinic Acid C4H low borderline
Lbowcontig_100033490 Rosmarinic Acid C4H low borderline
Lbowcontig_100037250 Rosmarinic Acid C4H medium pass
Lbowcontig_10003990 Rosmarinic Acid C4H medium pass
Lbowcontig_10009100 Rosmarinic Acid C4H medium pass
Lbowcontig_10015290 Rosmarinic Acid C4H low borderline
Lbowcontig_10015930 Rosmarinic Acid C4H medium pass
Lbowcontig_10016140 Rosmarinic Acid C4H low borderline
Lbowcontig_120054700 Rosmarinic Acid C4H medium pass