PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

998
Candidate Protein Records
694
Pathway-Level Records
1996
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lbowcontig_50277590 Alkaloid T3O low borderline
Lbowcontig_60293180 Alkaloid T3O medium borderline
Lbowcontig_60298530 Alkaloid T3O medium borderline
Lbowcontig_60298590 Alkaloid T3O medium borderline
Lbowcontig_60301650 Alkaloid T3O medium borderline
Lbowcontig_60301670 Alkaloid T3O medium borderline
Lbowcontig_60301710 Alkaloid T3O medium borderline
Lbowcontig_60305280 Alkaloid T3O medium borderline
Lbowcontig_60316560 Alkaloid T3O low borderline
Lbowcontig_60318260 Alkaloid T3O medium pass
Lbowcontig_60318960 Alkaloid T3O medium borderline
Lbowcontig_60322460 Alkaloid T3O medium pass
Lbowcontig_60323570 Alkaloid T3O low borderline
Lbowcontig_80325310 Alkaloid T3O medium borderline
Lbowcontig_80342570 Alkaloid T3O medium pass
Lbowcontig_80344110 Alkaloid T3O medium borderline
Lbowcontig_90349770 Alkaloid T3O medium pass
Lbowcontig_160132700 Alkaloid TDC low borderline
Lbowcontig_160132750 Alkaloid TDC low borderline
Lbowcontig_160140980 Alkaloid TDC medium borderline
Lbowcontig_200176590 Alkaloid TDC low borderline
Lbowcontig_200205250 Alkaloid TDC low borderline
Lbowcontig_100026890 Alkaloid TRI/TRII medium pass
Lbowcontig_100039900 Alkaloid TRI/TRII medium pass
Lbowcontig_120087820 Alkaloid TRI/TRII medium pass
Lbowcontig_120088150 Alkaloid TRI/TRII medium pass
Lbowcontig_150111950 Alkaloid TRI/TRII low borderline
Lbowcontig_160117920 Alkaloid TRI/TRII medium pass
Lbowcontig_190161130 Alkaloid TRI/TRII medium pass
Lbowcontig_40238420 Alkaloid TRI/TRII medium pass
Lbowcontig_40250030 Alkaloid TRI/TRII low borderline
Lbowcontig_40250050 Alkaloid TRI/TRII low borderline
Lbowcontig_50283240 Alkaloid TRI/TRII medium pass
Lbowcontig_60304250 Alkaloid TRI/TRII low borderline
Lbowcontig_60312550 Alkaloid TRI/TRII medium pass
Lbowcontig_90359060 Alkaloid TRI/TRII low borderline
Lbowcontig_90363470 Alkaloid TRI/TRII medium pass
Lbowcontig_90363480 Alkaloid TRI/TRII low borderline
Lbowcontig_90369160 Alkaloid TRI/TRII low borderline
Lbowcontig_160144920 Alkaloid TYDC_DDC medium borderline