PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Lbowcontig_100022370 Alkaloid 8HGO medium borderline
Lbowcontig_200180550 Alkaloid 8HGO medium borderline
Lbowcontig_40246070 Alkaloid 8HGO medium pass
Lbowcontig_40246860 Alkaloid 8HGO medium borderline
Lbowcontig_50270500 Alkaloid 8HGO medium borderline
Lbowcontig_60322250 Alkaloid 8HGO low borderline
Lbowcontig_90350380 Alkaloid 8HGO medium borderline
Lbowcontig_90356240 Alkaloid 8HGO medium borderline
Lbowcontig_190163470 Alkaloid ADC medium pass
Lbowcontig_40230900 Alkaloid ADC low borderline
Lbowcontig_80328170 Alkaloid ADC medium pass
Lbowcontig_100018810 Alkaloid BBE low borderline
Lbowcontig_120077200 Alkaloid BBE low borderline
Lbowcontig_160142120 Alkaloid BBE low borderline
Lbowcontig_80325290 Alkaloid BBE low borderline
Lbowcontig_90368320 Alkaloid BBE low borderline
Lbowcontig_100022580 Alkaloid CNMT low borderline
Lbowcontig_10007020 Alkaloid CNMT low borderline
Lbowcontig_10015470 Alkaloid CNMT low borderline
Lbowcontig_120070350 Alkaloid CNMT low borderline
Lbowcontig_130093300 Alkaloid CNMT low borderline
Lbowcontig_160118050 Alkaloid CNMT low borderline
Lbowcontig_190159550 Alkaloid CNMT low borderline
Lbowcontig_40252230 Alkaloid CNMT low borderline
Lbowcontig_50285600 Alkaloid CNMT low borderline
Lbowcontig_60309670 Alkaloid CNMT low borderline
Lbowcontig_90360190 Alkaloid CNMT medium borderline
Lbowcontig_90369710 Alkaloid CNMT low borderline
Lbowcontig_100033920 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_10005250 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_10011120 Alkaloid CODM/T6ODM low borderline
Lbowcontig_110046890 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_120052520 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_120052820 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_120074260 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_120080650 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_120085210 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_120092170 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_140101150 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_160116670 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_160119390 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_190159380 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_200186480 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_200187770 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_200187830 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_200187850 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_200197570 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_200208560 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_40237640 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_40237660 Alkaloid CODM/T6ODM medium borderline