PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Lbowcontig_120092170 Flavonoid F3H low borderline
Lbowcontig_160116670 Flavonoid F3H medium borderline
Lbowcontig_160117440 Flavonoid F3H medium borderline
Lbowcontig_160119390 Flavonoid F3H medium pass
Lbowcontig_190154520 Flavonoid F3H medium borderline
Lbowcontig_190159380 Flavonoid F3H medium borderline
Lbowcontig_200179390 Flavonoid F3H medium borderline
Lbowcontig_200186480 Flavonoid F3H low borderline
Lbowcontig_200187770 Flavonoid F3H medium borderline
Lbowcontig_200187830 Flavonoid F3H medium borderline
Lbowcontig_200187850 Flavonoid F3H medium borderline
Lbowcontig_200197570 Flavonoid F3H medium borderline
Lbowcontig_200208560 Flavonoid F3H low borderline
Lbowcontig_30226950 Flavonoid F3H medium borderline
Lbowcontig_40237640 Flavonoid F3H medium borderline
Lbowcontig_40237660 Flavonoid F3H medium borderline
Lbowcontig_40237920 Flavonoid F3H medium borderline
Lbowcontig_50276580 Flavonoid F3H medium borderline
Lbowcontig_50284780 Flavonoid F3H medium borderline
Lbowcontig_60287790 Flavonoid F3H medium borderline
Lbowcontig_60289240 Flavonoid F3H medium borderline
Lbowcontig_60301980 Flavonoid F3H low borderline
Lbowcontig_80329090 Flavonoid F3H medium borderline
Lbowcontig_80331340 Flavonoid F3H low borderline
Lbowcontig_80332050 Flavonoid F3H low borderline
Lbowcontig_80332140 Flavonoid F3H medium borderline
Lbowcontig_80338280 Flavonoid F3H medium borderline
Lbowcontig_90355020 Flavonoid F3H low borderline
Lbowcontig_90355030 Flavonoid F3H medium pass
Lbowcontig_90369580 Flavonoid F3H low borderline
Lbowcontig_120085210 Flavonoid FLS medium borderline
Lbowcontig_100028470 Flavonoid FNS medium borderline
Lbowcontig_10016140 Flavonoid FNS medium borderline
Lbowcontig_160123260 Flavonoid FNS medium borderline
Lbowcontig_200197550 Flavonoid FNS medium borderline
Lbowcontig_200206240 Flavonoid FNS low borderline
Lbowcontig_40232220 Flavonoid FNS low borderline
Lbowcontig_50268880 Flavonoid FNS low borderline
Lbowcontig_50277270 Flavonoid FNS medium borderline
Lbowcontig_60288040 Flavonoid FNS medium borderline
Lbowcontig_60310790 Flavonoid FNS medium borderline
Lbowcontig_60312070 Flavonoid FNS medium pass
Lbowcontig_60312110 Flavonoid FNS medium borderline
Lbowcontig_90347240 Flavonoid FNS medium borderline
Lbowcontig_10015770 Flavonoid IFR low borderline
Lbowcontig_120049210 Flavonoid IFR medium pass
Lbowcontig_120052230 Flavonoid IFR low borderline
Lbowcontig_120061850 Flavonoid IFR medium pass
Lbowcontig_120076500 Flavonoid IFR low borderline
Lbowcontig_120079320 Flavonoid IFR low borderline