Leucobryum bowringii (leucobryum_bowringii)
Imported from atlas release summary for Leucobryum bowringii.
694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
694
Candidate Genes
C4H
7.52%
C3'H/CYP98A
6.86%
CYP76
5.81%
BAHD
4.71%
4CL
4.56%
POD
4.21%
IFS
4.11%
NMT
3.46%
Other Families
58.77%
More Families (95)
BR6OX2/CYP85A2
59
2.96%
DWF4/CYP90B1
52
2.61%
T3O
51
2.56%
STR
45
2.25%
PAL
45
2.25%
IO
44
2.2%
F3H
43
2.15%
IFR
40
2.0%
F3'H/CYP75B
39
1.95%
CODM/T6ODM
34
1.7%
PYKS
31
1.55%
GS
30
1.5%
UGT
30
1.5%
UFGT
29
1.45%
7DLGT
27
1.35%
SMT1/SMT2/SMT3
24
1.2%
LAC
23
1.15%
COMT
22
1.1%
G8O/G8H
21
1.05%
T16H
21
1.05%
CHS
20
1.0%
F3'5'H/CYP75A
20
1.0%
CAD
19
0.95%
CAS
18
0.9%
TRI/TRII
17
0.85%
CSE
16
0.8%
CYP71
15
0.75%
SGD
14
0.7%
SLS
13
0.65%
16OMT
13
0.65%
FNS
13
0.65%
CNMT
12
0.6%
LAMT
12
0.6%
H6H
12
0.6%
HCT
11
0.55%
RAS
11
0.55%
CPD/CYP90A1
9
0.45%
8HGO
8
0.4%
COR
8
0.4%
NCS
8
0.4%
CYP51G1
8
0.4%
SQS/FDFT1
8
0.4%
AACT
8
0.4%
7DLH
7
0.35%
CYP80B1
7
0.35%
ANR
7
0.35%
DET2
7
0.35%
F5H/CYP84A
6
0.3%
BR6OX1/CYP85A1
6
0.3%
CYP90D1
6
0.3%
BBE
5
0.25%
PMT
5
0.25%
TDC
5
0.25%
CCR
5
0.25%
TAT
5
0.25%
ROT3/CYP90C1
5
0.25%
DWF5
5
0.25%
FPPS
5
0.25%
MVK
5
0.25%
CYP719
4
0.2%
MPO
4
0.2%
DFR
4
0.2%
CHI
4
0.2%
ANS/LDOX
4
0.2%
CPR
4
0.2%
TPS
4
0.2%
GGPPS
4
0.2%
GES
3
0.15%
ISY
3
0.15%
6OMT_4OMT_SOMT
3
0.15%
ADC
3
0.15%
HPPR
3
0.15%
SQE
3
0.15%
CCoAOMT
2
0.1%
SMO1/SMO2
2
0.1%
MCT/IspD
2
0.1%
MVD
2
0.1%
HMGS
2
0.1%
HDS/IspG
2
0.1%
DXS
2
0.1%
TYDC_DDC
1
0.05%
FLS
1
0.05%
HYD1
1
0.05%
DWF1
1
0.05%
FK
1
0.05%
CPI1
1
0.05%
DWF7
1
0.05%
MDS/IspF
1
0.05%
PMK
1
0.05%
DXR
1
0.05%
CMK/IspE
1
0.05%
GPPS
1
0.05%
IDI
1
0.05%
HDR/IspH
1
0.05%
HMGR
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 184 | 10 | POD (78) | View species results |
| Terpenoid pathway | 155 | 19 | BAHD (59) | View species results |
| Alkaloid pathway | 141 | 17 | NMT (27) | View species results |
| Flavonoid pathway | 88 | 10 | UFGT (25) | View species results |
| Rosmarinic acid pathway | 80 | 7 | C4H (38) | View species results |
| Steroid pathway | 46 | 12 | CAS (16) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 878 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 116 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Lbowcontig_50268790 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_50274110 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_50277270 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_50277590 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_50281860 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_50282940 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_50285340 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_60298590 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_60301630 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_60301670 | Steroid | DWF4/CYP90B1 | medium | borderline |
| Lbowcontig_60301710 | Steroid | DWF4/CYP90B1 | medium | borderline |
| Lbowcontig_60312120 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_60315430 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_60319770 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_80324850 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_80344110 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_90349770 | Steroid | DWF4/CYP90B1 | low | borderline |
| Lbowcontig_100029760 | Steroid | DWF5 | medium | pass |
| Lbowcontig_120055750 | Steroid | DWF5 | medium | pass |
| Lbowcontig_190153260 | Steroid | DWF5 | medium | pass |
| Lbowcontig_50262790 | Steroid | DWF5 | medium | pass |
| Lbowcontig_80344830 | Steroid | DWF5 | medium | pass |
| Lbowcontig_60316510 | Steroid | DWF7 | medium | pass |
| Lbowcontig_190155540 | Steroid | FK | high | pass |
| Lbowcontig_110048640 | Steroid | HYD1 | high | pass |
| Lbowcontig_100025220 | Steroid | ROT3/CYP90C1 | low | borderline |
| Lbowcontig_150105530 | Steroid | ROT3/CYP90C1 | medium | borderline |
| Lbowcontig_150105550 | Steroid | ROT3/CYP90C1 | medium | borderline |
| Lbowcontig_160145560 | Steroid | ROT3/CYP90C1 | low | borderline |
| Lbowcontig_60322460 | Steroid | ROT3/CYP90C1 | medium | borderline |
| Lbowcontig_120060400 | Steroid | SMO1/SMO2 | medium | pass |
| Lbowcontig_160130640 | Steroid | SMO1/SMO2 | medium | pass |
| Lbowcontig_100024990 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_100032160 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_10010100 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_120059220 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_120060510 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_140096670 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_140096700 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_140100980 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_150104700 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_150106530 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_150111720 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_160125300 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_160126070 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_160138820 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_170148840 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_190158700 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_200192040 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_200210580 | Steroid | SMT1/SMT2/SMT3 | low | borderline |