PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Lbowcontig_100031040 Alkaloid IO medium borderline
Lbowcontig_10003990 Alkaloid IO medium borderline
Lbowcontig_10015290 Alkaloid IO medium borderline
Lbowcontig_10015930 Alkaloid IO medium borderline
Lbowcontig_120060460 Alkaloid IO low borderline
Lbowcontig_120066540 Alkaloid IO medium borderline
Lbowcontig_120078190 Alkaloid IO medium borderline
Lbowcontig_120079560 Alkaloid IO low borderline
Lbowcontig_120080600 Alkaloid IO medium borderline
Lbowcontig_120080810 Alkaloid IO medium borderline
Lbowcontig_120081500 Alkaloid IO medium borderline
Lbowcontig_120084010 Alkaloid IO medium borderline
Lbowcontig_120084030 Alkaloid IO medium borderline
Lbowcontig_120088190 Alkaloid IO medium borderline
Lbowcontig_160138240 Alkaloid IO medium borderline
Lbowcontig_160139000 Alkaloid IO medium borderline
Lbowcontig_190152480 Alkaloid IO medium borderline
Lbowcontig_190152790 Alkaloid IO medium borderline
Lbowcontig_190155570 Alkaloid IO medium borderline
Lbowcontig_200197050 Alkaloid IO medium borderline
Lbowcontig_200199390 Alkaloid IO medium borderline
Lbowcontig_30223320 Alkaloid IO low borderline
Lbowcontig_40242390 Alkaloid IO medium borderline
Lbowcontig_40244170 Alkaloid IO medium borderline
Lbowcontig_50264580 Alkaloid IO medium borderline
Lbowcontig_50268880 Alkaloid IO low borderline
Lbowcontig_50271610 Alkaloid IO low borderline
Lbowcontig_50274110 Alkaloid IO medium borderline
Lbowcontig_60291080 Alkaloid IO low borderline
Lbowcontig_60291140 Alkaloid IO low borderline
Lbowcontig_60302170 Alkaloid IO low borderline
Lbowcontig_60312090 Alkaloid IO medium borderline
Lbowcontig_80328650 Alkaloid IO medium borderline
Lbowcontig_80330780 Alkaloid IO low borderline
Lbowcontig_80343330 Alkaloid IO medium borderline
Lbowcontig_80343920 Alkaloid IO medium borderline
Lbowcontig_90347240 Alkaloid IO low borderline
Lbowcontig_90362230 Alkaloid IO medium borderline
Lbowcontig_90362250 Alkaloid IO medium borderline
Lbowcontig_90369520 Alkaloid IO medium borderline
Lbowcontig_90369920 Alkaloid IO medium borderline
Lbowcontig_120065770 Alkaloid ISY low borderline
Lbowcontig_150110060 Alkaloid ISY medium pass
Lbowcontig_190152710 Alkaloid ISY medium pass
Lbowcontig_100023390 Alkaloid LAMT medium pass
Lbowcontig_10002620 Alkaloid LAMT medium pass
Lbowcontig_120048750 Alkaloid LAMT low borderline
Lbowcontig_190156350 Alkaloid LAMT medium pass
Lbowcontig_40244600 Alkaloid LAMT medium pass
Lbowcontig_40244620 Alkaloid LAMT medium pass