PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Lbowcontig_40244630 Alkaloid LAMT medium pass
Lbowcontig_50258470 Alkaloid LAMT low borderline
Lbowcontig_50264770 Alkaloid LAMT low borderline
Lbowcontig_60297620 Alkaloid LAMT medium borderline
Lbowcontig_80329990 Alkaloid LAMT medium borderline
Lbowcontig_80340730 Alkaloid LAMT medium pass
Lbowcontig_50263510 Alkaloid MPO high pass
Lbowcontig_50265650 Alkaloid MPO high pass
Lbowcontig_60292590 Alkaloid MPO medium pass
Lbowcontig_90351290 Alkaloid MPO high pass
Lbowcontig_110046880 Alkaloid NCS medium borderline
Lbowcontig_110047260 Alkaloid NCS medium borderline
Lbowcontig_130093650 Alkaloid NCS low borderline
Lbowcontig_140099020 Alkaloid NCS low borderline
Lbowcontig_40245210 Alkaloid NCS low borderline
Lbowcontig_60287790 Alkaloid NCS medium borderline
Lbowcontig_90355020 Alkaloid NCS medium borderline
Lbowcontig_90369580 Alkaloid NCS medium borderline
Lbowcontig_100019400 Alkaloid NMT medium borderline
Lbowcontig_10002000 Alkaloid NMT medium pass
Lbowcontig_10003600 Alkaloid NMT medium pass
Lbowcontig_100039090 Alkaloid NMT low borderline
Lbowcontig_10014900 Alkaloid NMT low borderline
Lbowcontig_110047600 Alkaloid NMT medium borderline
Lbowcontig_120048740 Alkaloid NMT low borderline
Lbowcontig_120051280 Alkaloid NMT low borderline
Lbowcontig_120055560 Alkaloid NMT low borderline
Lbowcontig_120056160 Alkaloid NMT medium pass
Lbowcontig_120060510 Alkaloid NMT medium borderline
Lbowcontig_120068220 Alkaloid NMT low borderline
Lbowcontig_120074230 Alkaloid NMT medium pass
Lbowcontig_120077150 Alkaloid NMT medium pass
Lbowcontig_120077230 Alkaloid NMT medium pass
Lbowcontig_120078600 Alkaloid NMT medium pass
Lbowcontig_120079940 Alkaloid NMT medium pass
Lbowcontig_120080340 Alkaloid NMT low borderline
Lbowcontig_120080370 Alkaloid NMT low borderline
Lbowcontig_140100710 Alkaloid NMT low borderline
Lbowcontig_150106560 Alkaloid NMT medium pass
Lbowcontig_150107810 Alkaloid NMT medium pass
Lbowcontig_150108400 Alkaloid NMT low borderline
Lbowcontig_150109000 Alkaloid NMT medium borderline
Lbowcontig_150111720 Alkaloid NMT medium borderline
Lbowcontig_160130350 Alkaloid NMT low borderline
Lbowcontig_160140000 Alkaloid NMT low borderline
Lbowcontig_160146350 Alkaloid NMT low borderline
Lbowcontig_170150350 Alkaloid NMT low borderline
Lbowcontig_190161080 Alkaloid NMT medium pass
Lbowcontig_190161210 Alkaloid NMT medium borderline
Lbowcontig_190162040 Alkaloid NMT low borderline