PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Lbowcontig_200176800 Alkaloid NMT low borderline
Lbowcontig_200176840 Alkaloid NMT medium pass
Lbowcontig_200184760 Alkaloid NMT low borderline
Lbowcontig_200189540 Alkaloid NMT low borderline
Lbowcontig_200204480 Alkaloid NMT low borderline
Lbowcontig_200206800 Alkaloid NMT medium pass
Lbowcontig_200206970 Alkaloid NMT low borderline
Lbowcontig_200210580 Alkaloid NMT medium borderline
Lbowcontig_20172220 Alkaloid NMT low borderline
Lbowcontig_30223600 Alkaloid NMT medium borderline
Lbowcontig_30226430 Alkaloid NMT medium borderline
Lbowcontig_40237200 Alkaloid NMT low borderline
Lbowcontig_40248760 Alkaloid NMT low borderline
Lbowcontig_40251840 Alkaloid NMT medium pass
Lbowcontig_40252200 Alkaloid NMT medium borderline
Lbowcontig_50268720 Alkaloid NMT low borderline
Lbowcontig_50269590 Alkaloid NMT medium pass
Lbowcontig_50278790 Alkaloid NMT medium pass
Lbowcontig_50282700 Alkaloid NMT low borderline
Lbowcontig_60299030 Alkaloid NMT low borderline
Lbowcontig_60302650 Alkaloid NMT low borderline
Lbowcontig_60305070 Alkaloid NMT medium pass
Lbowcontig_60310640 Alkaloid NMT medium pass
Lbowcontig_60318480 Alkaloid NMT medium pass
Lbowcontig_60318500 Alkaloid NMT medium pass
Lbowcontig_80328100 Alkaloid NMT medium pass
Lbowcontig_80328380 Alkaloid NMT low borderline
Lbowcontig_80332600 Alkaloid NMT medium pass
Lbowcontig_80341230 Alkaloid NMT medium pass
Lbowcontig_80343280 Alkaloid NMT medium pass
Lbowcontig_80344990 Alkaloid NMT medium pass
Lbowcontig_90351570 Alkaloid NMT medium pass
Lbowcontig_90355200 Alkaloid NMT low borderline
Lbowcontig_90356650 Alkaloid NMT medium pass
Lbowcontig_90357990 Alkaloid NMT low borderline
Lbowcontig_90362360 Alkaloid NMT low borderline
Lbowcontig_90364560 Alkaloid NMT medium borderline
Lbowcontig_140100590 Alkaloid PMT low borderline
Lbowcontig_190154650 Alkaloid PMT medium pass
Lbowcontig_40251830 Alkaloid PMT medium pass
Lbowcontig_80341270 Alkaloid PMT medium pass
Lbowcontig_90352290 Alkaloid PMT medium borderline
Lbowcontig_10000860 Alkaloid PYKS high pass
Lbowcontig_100025890 Alkaloid PYKS high pass
Lbowcontig_120067940 Alkaloid PYKS medium pass
Lbowcontig_120078170 Alkaloid PYKS high pass
Lbowcontig_150102770 Alkaloid PYKS low borderline
Lbowcontig_160129310 Alkaloid PYKS low borderline
Lbowcontig_170147210 Alkaloid PYKS low borderline
Lbowcontig_180152280 Alkaloid PYKS low borderline