PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

998
Candidate Protein Records
694
Pathway-Level Records
1996
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Lbowcontig_60310090 Terpenoid HMGR medium pass
Lbowcontig_200188710 Terpenoid HMGS high pass
Lbowcontig_80326240 Terpenoid HMGS high pass
Lbowcontig_40255150 Terpenoid IDI medium pass
Lbowcontig_150106690 Terpenoid MCT/IspD high pass
Lbowcontig_160129990 Terpenoid MCT/IspD low borderline
Lbowcontig_100019330 Terpenoid MDS/IspF high pass
Lbowcontig_150109560 Terpenoid MVD low borderline
Lbowcontig_80328360 Terpenoid MVD medium pass
Lbowcontig_110043800 Terpenoid MVK low borderline
Lbowcontig_120052610 Terpenoid MVK low borderline
Lbowcontig_190155740 Terpenoid MVK low borderline
Lbowcontig_50259700 Terpenoid MVK medium pass
Lbowcontig_90370240 Terpenoid MVK low borderline
Lbowcontig_10016900 Terpenoid PMK medium pass
Lbowcontig_120060750 Terpenoid TPS medium pass
Lbowcontig_50266580 Terpenoid TPS low borderline
Lbowcontig_60293470 Terpenoid TPS medium pass
Lbowcontig_60323540 Terpenoid TPS medium pass
Lbowcontig_100030820 Terpenoid UGT low borderline
Lbowcontig_100032540 Terpenoid UGT medium pass
Lbowcontig_100037830 Terpenoid UGT medium pass
Lbowcontig_10006680 Terpenoid UGT medium pass
Lbowcontig_120056940 Terpenoid UGT medium pass
Lbowcontig_120071090 Terpenoid UGT medium pass
Lbowcontig_120087690 Terpenoid UGT low borderline
Lbowcontig_200180290 Terpenoid UGT medium pass
Lbowcontig_200180300 Terpenoid UGT medium pass
Lbowcontig_200180800 Terpenoid UGT medium pass
Lbowcontig_200183140 Terpenoid UGT medium pass
Lbowcontig_200184610 Terpenoid UGT medium pass
Lbowcontig_200188140 Terpenoid UGT medium pass
Lbowcontig_200206530 Terpenoid UGT medium pass
Lbowcontig_40250870 Terpenoid UGT medium pass
Lbowcontig_40256830 Terpenoid UGT medium pass
Lbowcontig_40256840 Terpenoid UGT medium pass
Lbowcontig_50265340 Terpenoid UGT medium pass
Lbowcontig_50275950 Terpenoid UGT medium pass
Lbowcontig_50280880 Terpenoid UGT medium pass
Lbowcontig_50280920 Terpenoid UGT medium pass
Lbowcontig_60301000 Terpenoid UGT medium pass
Lbowcontig_60302290 Terpenoid UGT medium pass
Lbowcontig_60319500 Terpenoid UGT medium pass
Lbowcontig_60319540 Terpenoid UGT medium pass
Lbowcontig_80324200 Terpenoid UGT low borderline
Lbowcontig_80339770 Terpenoid UGT medium pass
Lbowcontig_90358130 Terpenoid UGT medium pass
Lbowcontig_90362650 Terpenoid UGT medium pass
Lbowcontig_90362660 Terpenoid UGT low borderline