PlantSME Plant secondary metabolism enzyme database

Lotus japonicus (lotus_japonicus)

Imported from atlas release summary for Lotus japonicus.

1869
Candidate Protein Records
1586
Pathway-Level Records
4066
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 442 19 BAHD (174) View species results
Alkaloid pathway 347 19 7DLGT (67) View species results
Phenylpropanoid pathway 322 12 POD (128) View species results
Flavonoid pathway 247 8 UFGT (165) View species results
Rosmarinic acid pathway 136 7 C4H (54) View species results
Steroid pathway 92 13 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1558 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 297 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LOTjap06G0017950.1 Rosmarinic Acid C4H low borderline
LOTjap06G0018210.1 Rosmarinic Acid C4H medium pass
LOTjap06G0019470.1 Rosmarinic Acid C4H low borderline
LOTjap06G0019480.1 Rosmarinic Acid C4H low borderline
LOTjap06G0021820.1 Rosmarinic Acid C4H medium pass
LOTjap06G0021830.1 Rosmarinic Acid C4H medium pass
LOTjap06G0023410.1 Rosmarinic Acid C4H low borderline
LOTjap06G0027160.1 Rosmarinic Acid C4H low borderline
LOTjap06G0027170.1 Rosmarinic Acid C4H low borderline
LOTjap06G0027240.1 Rosmarinic Acid C4H low borderline
LOTjap06G0027250.1 Rosmarinic Acid C4H low borderline
LOTjap06G0027260.1 Rosmarinic Acid C4H low borderline
LOTjap06G0028210.1 Rosmarinic Acid C4H low borderline
LOTjap06G0028220.1 Rosmarinic Acid C4H low borderline
LOTjapContig000810001810.1 Rosmarinic Acid C4H low borderline
LOTjapContig000810001820.1 Rosmarinic Acid C4H low borderline
LOTjapContig001360003960.1 Rosmarinic Acid C4H low borderline
LOTjapContig001360003980.1 Rosmarinic Acid C4H low borderline
LOTjapContig001360003990.1 Rosmarinic Acid C4H low borderline
LOTjapContig001360004010.1 Rosmarinic Acid C4H medium pass
LOTjapContig001410006460.1 Rosmarinic Acid C4H medium pass
LOTjapContig002220008800.1 Rosmarinic Acid C4H low borderline
LOTjapContig002220009450.1 Rosmarinic Acid C4H medium pass
LOTjapContig003100012220.1 Rosmarinic Acid C4H low borderline
LOTjapContig003570015400.1 Rosmarinic Acid C4H low borderline
LOTjapContig004120017520.1 Rosmarinic Acid C4H low borderline
LOTjap01G0024610.1 Rosmarinic Acid CPR medium pass
LOTjap01G0042570.1 Rosmarinic Acid CPR medium pass
LOTjap01G0051280.1 Rosmarinic Acid CPR medium pass
LOTjap03G0033390.1 Rosmarinic Acid CPR medium pass
LOTjap03G0033400.1 Rosmarinic Acid CPR medium pass
LOTjap04G0016640.1 Rosmarinic Acid CPR medium pass
LOTjap04G0016660.1 Rosmarinic Acid CPR medium pass
LOTjap06G0004880.1 Rosmarinic Acid CPR low borderline
LOTjap06G0008200.1 Rosmarinic Acid CPR low borderline
LOTjap06G0026500.1 Rosmarinic Acid CPR medium pass
LOTjap02G0000490.1 Rosmarinic Acid HPPR medium pass
LOTjap02G0000500.1 Rosmarinic Acid HPPR medium pass
LOTjap02G0000510.1 Rosmarinic Acid HPPR medium pass
LOTjap02G0013550.1 Rosmarinic Acid HPPR low borderline
LOTjap03G0014570.1 Rosmarinic Acid HPPR low borderline
LOTjap03G0020510.1 Rosmarinic Acid HPPR medium pass
LOTjap03G0051130.1 Rosmarinic Acid HPPR medium pass
LOTjap01G0008500.1 Rosmarinic Acid PAL high pass
LOTjap01G0008510.1 Rosmarinic Acid PAL high pass
LOTjap01G0008520.1 Rosmarinic Acid PAL high pass
LOTjap01G0008530.1 Rosmarinic Acid PAL high pass
LOTjap03G0045640.1 Rosmarinic Acid PAL high pass
LOTjap03G0045660.1 Rosmarinic Acid PAL high pass
LOTjap05G0008910.1 Rosmarinic Acid PAL high pass