PlantSME Plant secondary metabolism enzyme database

Neolamarckia cadamba (neolamarckia_cadamba)

Imported from atlas release summary for Neolamarckia cadamba.

2418
Candidate Protein Records
2110
Pathway-Level Records
4914
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 593 21 UGT (235) View species results
Alkaloid pathway 535 23 7DLGT (99) View species results
Phenylpropanoid pathway 400 13 POD (154) View species results
Flavonoid pathway 301 13 UFGT (199) View species results
Rosmarinic acid pathway 163 7 C4H (53) View species results
Steroid pathway 118 12 CAS (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1773 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 323 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Protein/Isoform Record Pathway Family Confidence Status Best Target
neolamarckia_cadamba_evm.model.Contig394.34 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig401.18 Rosmarinic Acid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
neolamarckia_cadamba_evm.model.Contig421.596 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
neolamarckia_cadamba_evm.model.Contig44.28 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig44.3 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig44.6 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig45.239 Rosmarinic Acid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
neolamarckia_cadamba_evm.model.Contig45.605 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig46.30 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
neolamarckia_cadamba_evm.model.Contig471.138 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
neolamarckia_cadamba_evm.model.Contig471.139 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
neolamarckia_cadamba_evm.model.Contig477.212 Rosmarinic Acid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
neolamarckia_cadamba_evm.model.Contig477.570 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
neolamarckia_cadamba_evm.model.Contig555.80 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
neolamarckia_cadamba_evm.model.Contig555.81 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
neolamarckia_cadamba_evm.model.Contig583.6 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
neolamarckia_cadamba_evm.model.Contig583.7 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
neolamarckia_cadamba_evm.model.Contig600.113 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
neolamarckia_cadamba_evm.model.Contig63.327 Rosmarinic Acid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
neolamarckia_cadamba_evm.model.Contig66.368 Rosmarinic Acid 4CL medium pass 4CL__00017__sp_Q9S725_4CL2_ARATH
neolamarckia_cadamba_evm.model.Contig66.7 Rosmarinic Acid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
neolamarckia_cadamba_evm.model.Contig66.84 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
neolamarckia_cadamba_evm.model.Contig721.47 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
neolamarckia_cadamba_evm.model.Contig81.437 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
neolamarckia_cadamba_evm.model.Contig81.944 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
neolamarckia_cadamba_evm.model.Contig935.6 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
neolamarckia_cadamba_evm.model.Contig943.665 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
neolamarckia_cadamba_evm.model.Contig943.93 Rosmarinic Acid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
neolamarckia_cadamba_evm.model.Contig96.533 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
neolamarckia_cadamba_evm.model.Contig96.784 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH