PlantSME Plant secondary metabolism enzyme database

Neolamarckia cadamba (neolamarckia_cadamba)

Imported from atlas release summary for Neolamarckia cadamba.

2110
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 593 21 UGT (235) View species results
Alkaloid pathway 535 23 7DLGT (99) View species results
Phenylpropanoid pathway 400 13 POD (154) View species results
Flavonoid pathway 301 13 UFGT (199) View species results
Rosmarinic acid pathway 163 7 C4H (53) View species results
Steroid pathway 118 12 CAS (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1773 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 323 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
neolamarckia_cadamba_evm.model.Contig117.13 Alkaloid PMT medium pass
neolamarckia_cadamba_evm.model.Contig14.163 Alkaloid PMT low borderline
neolamarckia_cadamba_evm.model.Contig16.103 Alkaloid PMT medium pass
neolamarckia_cadamba_evm.model.Contig16.500 Alkaloid PMT medium pass
neolamarckia_cadamba_evm.model.Contig16.834 Alkaloid PMT medium pass
neolamarckia_cadamba_evm.model.Contig179.29 Alkaloid PMT low borderline
neolamarckia_cadamba_evm.model.Contig180.272 Alkaloid PMT low borderline
neolamarckia_cadamba_evm.model.Contig184.275 Alkaloid PMT medium borderline
neolamarckia_cadamba_evm.model.Contig204.1.1 Alkaloid PMT low borderline
neolamarckia_cadamba_evm.model.Contig21.326 Alkaloid PMT low borderline
neolamarckia_cadamba_evm.model.Contig250.200 Alkaloid PMT medium borderline
neolamarckia_cadamba_evm.model.Contig254.19 Alkaloid PMT medium pass
neolamarckia_cadamba_evm.model.Contig358.25 Alkaloid PMT medium pass
neolamarckia_cadamba_evm.model.Contig437.151 Alkaloid PMT medium pass
neolamarckia_cadamba_evm.model.Contig447.235 Alkaloid PMT medium pass
neolamarckia_cadamba_evm.model.Contig45.266 Alkaloid PMT low borderline
neolamarckia_cadamba_evm.model.Contig471.249 Alkaloid PMT medium borderline
neolamarckia_cadamba_evm.model.Contig60.131 Alkaloid PMT medium borderline
neolamarckia_cadamba_evm.model.Contig721.21 Alkaloid PMT low borderline
neolamarckia_cadamba_evm.model.Contig78.30 Alkaloid PMT low borderline
neolamarckia_cadamba_evm.model.Contig84.229 Alkaloid PMT low borderline
neolamarckia_cadamba_evm.model.Contig96.44 Alkaloid PMT medium pass
neolamarckia_cadamba_evm.model.Contig96.638 Alkaloid PMT medium borderline
neolamarckia_cadamba_evm.model.Contig96.860 Alkaloid PMT low borderline
neolamarckia_cadamba_evm.model.Contig96.861 Alkaloid PMT low borderline
neolamarckia_cadamba_evm.model.Contig96.868 Alkaloid PMT medium pass