PlantSME Plant secondary metabolism enzyme database

Neolamarckia cadamba (neolamarckia_cadamba)

Imported from atlas release summary for Neolamarckia cadamba.

2110
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 593 21 UGT (235) View species results
Alkaloid pathway 535 23 7DLGT (99) View species results
Phenylpropanoid pathway 400 13 POD (154) View species results
Flavonoid pathway 301 13 UFGT (199) View species results
Rosmarinic acid pathway 163 7 C4H (53) View species results
Steroid pathway 118 12 CAS (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1773 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 323 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status Best Target
neolamarckia_cadamba_evm.model.Contig143.109 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
neolamarckia_cadamba_evm.model.Contig143.110 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
neolamarckia_cadamba_evm.model.Contig143.111 Alkaloid TRI/TRII medium pass TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
neolamarckia_cadamba_evm.model.Contig143.112 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
neolamarckia_cadamba_evm.model.Contig143.95 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
neolamarckia_cadamba_evm.model.Contig146.6 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
neolamarckia_cadamba_evm.model.Contig154.416 Alkaloid TRI/TRII medium pass TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
neolamarckia_cadamba_evm.model.Contig154.533 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
neolamarckia_cadamba_evm.model.Contig180.574 Alkaloid TRI/TRII low borderline TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig180.575 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig180.576 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig180.577 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig180.578 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig184.111 Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
neolamarckia_cadamba_evm.model.Contig184.452 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
neolamarckia_cadamba_evm.model.Contig245.11 Alkaloid TRI/TRII low borderline TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
neolamarckia_cadamba_evm.model.Contig250.965 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig271.121 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
neolamarckia_cadamba_evm.model.Contig276.1013 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
neolamarckia_cadamba_evm.model.Contig276.1248 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
neolamarckia_cadamba_evm.model.Contig296.246 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
neolamarckia_cadamba_evm.model.Contig296.247 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
neolamarckia_cadamba_evm.model.Contig296.343 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
neolamarckia_cadamba_evm.model.Contig333.27 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
neolamarckia_cadamba_evm.model.Contig341.29 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
neolamarckia_cadamba_evm.model.Contig341.518 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig421.457 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig435.37 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
neolamarckia_cadamba_evm.model.Contig435.38 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
neolamarckia_cadamba_evm.model.Contig435.39 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig435.40 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig45.320 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
neolamarckia_cadamba_evm.model.Contig462.260 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig462.90 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
neolamarckia_cadamba_evm.model.Contig464.47 Alkaloid TRI/TRII low borderline TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig47.20 Alkaloid TRI/TRII low borderline TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
neolamarckia_cadamba_evm.model.Contig480.37 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
neolamarckia_cadamba_evm.model.Contig488.66 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig488.67 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
neolamarckia_cadamba_evm.model.Contig490.20 Alkaloid TRI/TRII medium pass TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
neolamarckia_cadamba_evm.model.Contig518.1 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
neolamarckia_cadamba_evm.model.Contig518.2 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
neolamarckia_cadamba_evm.model.Contig52.15 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig531.26 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig531.27 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig540.18 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
neolamarckia_cadamba_evm.model.Contig57.179 Alkaloid TRI/TRII low borderline TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
neolamarckia_cadamba_evm.model.Contig63.117 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
neolamarckia_cadamba_evm.model.Contig63.318 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
neolamarckia_cadamba_evm.model.Contig63.319 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST