PlantSME Plant secondary metabolism enzyme database

Neolamarckia cadamba (neolamarckia_cadamba)

Imported from atlas release summary for Neolamarckia cadamba.

2110
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 593 21 UGT (235) View species results
Alkaloid pathway 535 23 7DLGT (99) View species results
Phenylpropanoid pathway 400 13 POD (154) View species results
Flavonoid pathway 301 13 UFGT (199) View species results
Rosmarinic acid pathway 163 7 C4H (53) View species results
Steroid pathway 118 12 CAS (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1773 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 323 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status Best Target
neolamarckia_cadamba_evm.model.Contig117.43_evm.model.Contig117.44 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
neolamarckia_cadamba_evm.model.Contig14.317 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
neolamarckia_cadamba_evm.model.Contig154.250.1 Flavonoid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
neolamarckia_cadamba_evm.model.Contig16.133 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig16.824 Flavonoid 4CL low borderline 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
neolamarckia_cadamba_evm.model.Contig16.922 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
neolamarckia_cadamba_evm.model.Contig184.105 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
neolamarckia_cadamba_evm.model.Contig186.19 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig20.158 Flavonoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
neolamarckia_cadamba_evm.model.Contig207.37 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
neolamarckia_cadamba_evm.model.Contig207.38 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
neolamarckia_cadamba_evm.model.Contig21.106 Flavonoid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
neolamarckia_cadamba_evm.model.Contig21.360 Flavonoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
neolamarckia_cadamba_evm.model.Contig21.361 Flavonoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
neolamarckia_cadamba_evm.model.Contig240.1827 Flavonoid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
neolamarckia_cadamba_evm.model.Contig240.1999 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
neolamarckia_cadamba_evm.model.Contig250.523 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
neolamarckia_cadamba_evm.model.Contig250.605 Flavonoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
neolamarckia_cadamba_evm.model.Contig264.255 Flavonoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
neolamarckia_cadamba_evm.model.Contig276.20 Flavonoid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
neolamarckia_cadamba_evm.model.Contig28.465 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
neolamarckia_cadamba_evm.model.Contig294.83.1 Flavonoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
neolamarckia_cadamba_evm.model.Contig309.14 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
neolamarckia_cadamba_evm.model.Contig341.674 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
neolamarckia_cadamba_evm.model.Contig345.31 Flavonoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
neolamarckia_cadamba_evm.model.Contig345.32 Flavonoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
neolamarckia_cadamba_evm.model.Contig363.130 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
neolamarckia_cadamba_evm.model.Contig363.131 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
neolamarckia_cadamba_evm.model.Contig381.24 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig387.13 Flavonoid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
neolamarckia_cadamba_evm.model.Contig394.34 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig401.18 Flavonoid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
neolamarckia_cadamba_evm.model.Contig421.596 Flavonoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
neolamarckia_cadamba_evm.model.Contig44.28 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig44.3 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig44.6 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig45.239 Flavonoid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
neolamarckia_cadamba_evm.model.Contig45.605 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
neolamarckia_cadamba_evm.model.Contig46.30 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
neolamarckia_cadamba_evm.model.Contig471.138 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
neolamarckia_cadamba_evm.model.Contig471.139 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
neolamarckia_cadamba_evm.model.Contig477.212 Flavonoid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
neolamarckia_cadamba_evm.model.Contig477.570 Flavonoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
neolamarckia_cadamba_evm.model.Contig555.80 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
neolamarckia_cadamba_evm.model.Contig555.81 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
neolamarckia_cadamba_evm.model.Contig583.6 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
neolamarckia_cadamba_evm.model.Contig583.7 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
neolamarckia_cadamba_evm.model.Contig600.113 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
neolamarckia_cadamba_evm.model.Contig63.327 Flavonoid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
neolamarckia_cadamba_evm.model.Contig66.368 Flavonoid 4CL medium pass 4CL__00017__sp_Q9S725_4CL2_ARATH