PlantSME Plant secondary metabolism enzyme database

Neolamarckia cadamba (neolamarckia_cadamba)

Imported from atlas release summary for Neolamarckia cadamba.

2110
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 593 21 UGT (235) View species results
Alkaloid pathway 535 23 7DLGT (99) View species results
Phenylpropanoid pathway 400 13 POD (154) View species results
Flavonoid pathway 301 13 UFGT (199) View species results
Rosmarinic acid pathway 163 7 C4H (53) View species results
Steroid pathway 118 12 CAS (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1773 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 323 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status Best Target
neolamarckia_cadamba_evm.model.Contig14.377 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
neolamarckia_cadamba_evm.model.Contig149.100 Phenylpropanoid CCR low borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
neolamarckia_cadamba_evm.model.Contig154.263 Phenylpropanoid CCR low borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
neolamarckia_cadamba_evm.model.Contig16.718 Phenylpropanoid CCR low borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
neolamarckia_cadamba_evm.model.Contig184.733 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
neolamarckia_cadamba_evm.model.Contig21.308 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
neolamarckia_cadamba_evm.model.Contig256.113 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
neolamarckia_cadamba_evm.model.Contig383.113 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
neolamarckia_cadamba_evm.model.Contig45.281 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
neolamarckia_cadamba_evm.model.Contig45.282 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
neolamarckia_cadamba_evm.model.Contig45.284 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
neolamarckia_cadamba_evm.model.Contig477.302_evm.model.Contig477.303 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
neolamarckia_cadamba_evm.model.Contig481.152 Phenylpropanoid CCR low borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
neolamarckia_cadamba_evm.model.Contig57.351 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
neolamarckia_cadamba_evm.model.Contig60.65 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
neolamarckia_cadamba_evm.model.Contig66.1209 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
neolamarckia_cadamba_evm.model.Contig66.1476 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
neolamarckia_cadamba_evm.model.Contig66.178 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
neolamarckia_cadamba_evm.model.Contig671.2 Phenylpropanoid CCR medium pass CCR__00009__sp_Q9SAH9_CCR2_ARATH
neolamarckia_cadamba_evm.model.Contig797.222 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
neolamarckia_cadamba_evm.model.Contig797.223 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
neolamarckia_cadamba_evm.model.Contig987.6 Phenylpropanoid CCR medium borderline CCR__00009__sp_Q9SAH9_CCR2_ARATH