PlantSME Plant secondary metabolism enzyme database

Neolamarckia cadamba (neolamarckia_cadamba)

Imported from atlas release summary for Neolamarckia cadamba.

2418
Candidate Protein Records
2110
Pathway-Level Records
4914
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 593 21 UGT (235) View species results
Alkaloid pathway 535 23 7DLGT (99) View species results
Phenylpropanoid pathway 400 13 POD (154) View species results
Flavonoid pathway 301 13 UFGT (199) View species results
Rosmarinic acid pathway 163 7 C4H (53) View species results
Steroid pathway 118 12 CAS (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1773 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 323 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
neolamarckia_cadamba_evm.model.Contig7.128 Steroid SMT1/SMT2/SMT3 low borderline
neolamarckia_cadamba_evm.model.Contig81.370 Steroid SMT1/SMT2/SMT3 medium pass
neolamarckia_cadamba_evm.model.Contig81.415 Steroid SMT1/SMT2/SMT3 low borderline
neolamarckia_cadamba_evm.model.Contig81.860 Steroid SMT1/SMT2/SMT3 medium pass
neolamarckia_cadamba_evm.model.Contig81.918 Steroid SMT1/SMT2/SMT3 low borderline
neolamarckia_cadamba_evm.model.Contig96.857 Steroid SMT1/SMT2/SMT3 medium pass
neolamarckia_cadamba_evm.model.Contig12.420 Steroid SQE medium pass
neolamarckia_cadamba_evm.model.Contig130.75 Steroid SQE low borderline
neolamarckia_cadamba_evm.model.Contig14.39_evm.model.Contig14.40 Steroid SQE medium pass
neolamarckia_cadamba_evm.model.Contig54.195 Steroid SQE medium pass
neolamarckia_cadamba_evm.model.Contig54.534 Steroid SQE medium pass
neolamarckia_cadamba_evm.model.Contig555.369 Steroid SQE medium pass
neolamarckia_cadamba_evm.model.Contig555.527 Steroid SQE medium pass
neolamarckia_cadamba_evm.model.Contig66.736 Steroid SQE medium pass
neolamarckia_cadamba_evm.model.Contig694.314 Steroid SQE medium pass
neolamarckia_cadamba_evm.model.Contig16.135 Steroid SQS/FDFT1 medium pass
neolamarckia_cadamba_evm.model.Contig276.428 Steroid SQS/FDFT1 low borderline
neolamarckia_cadamba_evm.model.Contig294.353 Steroid SQS/FDFT1 low borderline
neolamarckia_cadamba_evm.model.Contig381.82 Steroid SQS/FDFT1 medium pass
neolamarckia_cadamba_evm.model.Contig383.467 Steroid SQS/FDFT1 low borderline
neolamarckia_cadamba_evm.model.Contig44.29 Steroid SQS/FDFT1 medium pass
neolamarckia_cadamba_evm.model.Contig477.464 Steroid SQS/FDFT1 high pass
neolamarckia_cadamba_evm.model.Contig491.46 Steroid SQS/FDFT1 medium pass
neolamarckia_cadamba_evm.model.Contig54.459 Steroid SQS/FDFT1 high pass