PlantSME Plant secondary metabolism enzyme database

Oryza punctata (oryza_punctata)

Imported from atlas release summary for Oryza punctata.

1726
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 522 19 BAHD (204) View species results
Alkaloid pathway 400 24 7DLGT (64) View species results
Flavonoid pathway 286 12 UFGT (158) View species results
Phenylpropanoid pathway 267 11 POD (97) View species results
Rosmarinic acid pathway 143 7 C4H (63) View species results
Steroid pathway 108 13 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 359 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
OPUNC02G05710.1 Rosmarinic Acid C4H medium pass
OPUNC02G05720.1 Rosmarinic Acid C4H low borderline
OPUNC02G05760.1 Rosmarinic Acid C4H low borderline
OPUNC02G05760.3 Rosmarinic Acid C4H low borderline
OPUNC02G07160.1 Rosmarinic Acid C4H low borderline
OPUNC02G07800.1 Rosmarinic Acid C4H low borderline
OPUNC02G08140.1 Rosmarinic Acid C4H low borderline
OPUNC02G10890.1 Rosmarinic Acid C4H low borderline
OPUNC02G14280.1 Rosmarinic Acid C4H medium pass
OPUNC02G14450.1 Rosmarinic Acid C4H medium pass
OPUNC02G14460.1 Rosmarinic Acid C4H medium pass
OPUNC02G15550.1 Rosmarinic Acid C4H medium pass
OPUNC02G15590.1 Rosmarinic Acid C4H medium pass
OPUNC02G15630.1 Rosmarinic Acid C4H low borderline
OPUNC02G15630.2 Rosmarinic Acid C4H low borderline
OPUNC02G15630.3 Rosmarinic Acid C4H low borderline
OPUNC02G16980.1 Rosmarinic Acid C4H low borderline
OPUNC02G19190.1 Rosmarinic Acid C4H medium pass
OPUNC02G19200.1 Rosmarinic Acid C4H medium pass
OPUNC02G21020.1 Rosmarinic Acid C4H low borderline
OPUNC02G21030.1 Rosmarinic Acid C4H low borderline
OPUNC02G26900.1 Rosmarinic Acid C4H low borderline
OPUNC03G00900.1 Rosmarinic Acid C4H medium pass
OPUNC03G02510.1 Rosmarinic Acid C4H low borderline
OPUNC03G04830.1 Rosmarinic Acid C4H low borderline
OPUNC03G10180.1 Rosmarinic Acid C4H low borderline
OPUNC03G10290.1 Rosmarinic Acid C4H medium pass
OPUNC03G10300.1 Rosmarinic Acid C4H medium pass
OPUNC03G15660.1 Rosmarinic Acid C4H low borderline
OPUNC03G15660.2 Rosmarinic Acid C4H low borderline
OPUNC03G17680.1 Rosmarinic Acid C4H low borderline
OPUNC03G20310.1 Rosmarinic Acid C4H low borderline
OPUNC03G21840.1 Rosmarinic Acid C4H low borderline
OPUNC03G21940.1 Rosmarinic Acid C4H low borderline
OPUNC03G22850.1 Rosmarinic Acid C4H medium pass
OPUNC03G22860.1 Rosmarinic Acid C4H low borderline
OPUNC03G22910.1 Rosmarinic Acid C4H low borderline
OPUNC03G22920.1 Rosmarinic Acid C4H medium pass
OPUNC03G22930.1 Rosmarinic Acid C4H medium pass
OPUNC03G23440.1 Rosmarinic Acid C4H low borderline
OPUNC03G25300.1 Rosmarinic Acid C4H medium pass
OPUNC03G30840.1 Rosmarinic Acid C4H low borderline
OPUNC03G31980.1 Rosmarinic Acid C4H low borderline
OPUNC03G31980.2 Rosmarinic Acid C4H low borderline
OPUNC03G31980.3 Rosmarinic Acid C4H medium pass
OPUNC03G31980.4 Rosmarinic Acid C4H low borderline
OPUNC03G31980.5 Rosmarinic Acid C4H medium pass
OPUNC03G31990.1 Rosmarinic Acid C4H medium pass
OPUNC03G31990.2 Rosmarinic Acid C4H medium pass
OPUNC03G37300.1 Rosmarinic Acid C4H low borderline