PlantSME Plant secondary metabolism enzyme database

Oryza punctata (oryza_punctata)

Imported from atlas release summary for Oryza punctata.

1726
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 522 19 BAHD (204) View species results
Alkaloid pathway 400 24 7DLGT (64) View species results
Flavonoid pathway 286 12 UFGT (158) View species results
Phenylpropanoid pathway 267 11 POD (97) View species results
Rosmarinic acid pathway 143 7 C4H (63) View species results
Steroid pathway 108 13 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 359 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
OPUNC01G14050.1 Rosmarinic Acid 4CL medium pass
OPUNC01G23970.1 Rosmarinic Acid 4CL low borderline
OPUNC01G25040.1 Rosmarinic Acid 4CL low borderline
OPUNC01G26600.1 Rosmarinic Acid 4CL low borderline
OPUNC01G26600.2 Rosmarinic Acid 4CL low borderline
OPUNC01G30820.1 Rosmarinic Acid 4CL low borderline
OPUNC01G30820.2 Rosmarinic Acid 4CL low borderline
OPUNC01G39510.1 Rosmarinic Acid 4CL medium pass
OPUNC01G39520.1 Rosmarinic Acid 4CL medium pass
OPUNC02G00880.1 Rosmarinic Acid 4CL medium pass
OPUNC02G05080.1 Rosmarinic Acid 4CL medium pass
OPUNC02G13350.1 Rosmarinic Acid 4CL low borderline
OPUNC02G16760.1 Rosmarinic Acid 4CL low borderline
OPUNC02G16760.2 Rosmarinic Acid 4CL low borderline
OPUNC02G21800.1 Rosmarinic Acid 4CL low borderline
OPUNC02G26510.1 Rosmarinic Acid 4CL medium pass
OPUNC02G34950.1 Rosmarinic Acid 4CL low borderline
OPUNC03G02180.1 Rosmarinic Acid 4CL medium pass
OPUNC03G02360.1 Rosmarinic Acid 4CL medium pass
OPUNC03G02360.2 Rosmarinic Acid 4CL medium pass
OPUNC03G02360.3 Rosmarinic Acid 4CL medium pass
OPUNC03G02470.1 Rosmarinic Acid 4CL low borderline
OPUNC03G02470.2 Rosmarinic Acid 4CL medium pass
OPUNC03G02470.3 Rosmarinic Acid 4CL medium pass
OPUNC03G03750.1 Rosmarinic Acid 4CL medium pass
OPUNC03G13970.1 Rosmarinic Acid 4CL low borderline
OPUNC03G23590.1 Rosmarinic Acid 4CL low borderline
OPUNC03G23590.2 Rosmarinic Acid 4CL low borderline
OPUNC03G23590.3 Rosmarinic Acid 4CL low borderline
OPUNC03G23590.4 Rosmarinic Acid 4CL low borderline
OPUNC03G23590.5 Rosmarinic Acid 4CL low borderline
OPUNC03G23590.6 Rosmarinic Acid 4CL low borderline
OPUNC03G37960.1 Rosmarinic Acid 4CL low borderline
OPUNC04G06070.1 Rosmarinic Acid 4CL medium pass
OPUNC04G09490.1 Rosmarinic Acid 4CL low borderline
OPUNC04G26940.1 Rosmarinic Acid 4CL medium pass
OPUNC04G27650.1 Rosmarinic Acid 4CL medium pass
OPUNC05G02150.1 Rosmarinic Acid 4CL low borderline
OPUNC05G09820.1 Rosmarinic Acid 4CL low borderline
OPUNC06G03630.1 Rosmarinic Acid 4CL low borderline
OPUNC06G03630.2 Rosmarinic Acid 4CL low borderline
OPUNC06G21110.1 Rosmarinic Acid 4CL medium pass
OPUNC07G09320.1 Rosmarinic Acid 4CL medium pass
OPUNC07G22380.1 Rosmarinic Acid 4CL medium pass
OPUNC08G01900.1 Rosmarinic Acid 4CL low borderline
OPUNC08G02470.1 Rosmarinic Acid 4CL medium pass
OPUNC08G07160.1 Rosmarinic Acid 4CL medium pass
OPUNC08G14530.1 Rosmarinic Acid 4CL medium pass
OPUNC09G17540.1 Rosmarinic Acid 4CL medium pass
OPUNC10G00190.1 Rosmarinic Acid 4CL low borderline