PlantSME Plant secondary metabolism enzyme database

Oryza punctata (oryza_punctata)

Imported from atlas release summary for Oryza punctata.

1726
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 522 19 BAHD (204) View species results
Alkaloid pathway 400 24 7DLGT (64) View species results
Flavonoid pathway 286 12 UFGT (158) View species results
Phenylpropanoid pathway 267 11 POD (97) View species results
Rosmarinic acid pathway 143 7 C4H (63) View species results
Steroid pathway 108 13 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 359 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status
OPUNC01G07080.1 Phenylpropanoid CSE medium pass
OPUNC01G07090.1 Phenylpropanoid CSE medium pass
OPUNC01G13000.1 Phenylpropanoid CSE medium pass
OPUNC01G13120.1 Phenylpropanoid CSE medium pass
OPUNC01G13610.1 Phenylpropanoid CSE medium pass
OPUNC01G14390.1 Phenylpropanoid CSE medium pass
OPUNC01G14400.1 Phenylpropanoid CSE medium pass
OPUNC01G22790.1 Phenylpropanoid CSE medium pass
OPUNC01G22800.1 Phenylpropanoid CSE medium pass
OPUNC01G26990.1 Phenylpropanoid CSE low borderline
OPUNC01G27000.1 Phenylpropanoid CSE medium pass
OPUNC01G35270.1 Phenylpropanoid CSE medium pass
OPUNC01G39920.1 Phenylpropanoid CSE medium pass
OPUNC01G44350.1 Phenylpropanoid CSE medium pass
OPUNC02G07300.1 Phenylpropanoid CSE medium pass
OPUNC02G14610.1 Phenylpropanoid CSE medium pass
OPUNC02G27730.1 Phenylpropanoid CSE medium pass
OPUNC03G18640.1 Phenylpropanoid CSE low borderline
OPUNC03G18640.2 Phenylpropanoid CSE low borderline
OPUNC03G18640.3 Phenylpropanoid CSE low borderline
OPUNC03G18640.4 Phenylpropanoid CSE low borderline
OPUNC04G03700.1 Phenylpropanoid CSE medium pass
OPUNC04G03760.1 Phenylpropanoid CSE medium pass
OPUNC04G03790.1 Phenylpropanoid CSE medium pass
OPUNC04G06120.1 Phenylpropanoid CSE medium pass
OPUNC04G25000.1 Phenylpropanoid CSE medium pass
OPUNC04G26560.1 Phenylpropanoid CSE medium pass
OPUNC04G26580.1 Phenylpropanoid CSE medium pass
OPUNC05G00580.1 Phenylpropanoid CSE medium pass
OPUNC05G11660.1 Phenylpropanoid CSE medium pass
OPUNC05G19810.1 Phenylpropanoid CSE medium pass
OPUNC07G00450.1 Phenylpropanoid CSE medium pass
OPUNC07G13740.1 Phenylpropanoid CSE low borderline
OPUNC07G17860.1 Phenylpropanoid CSE medium pass
OPUNC08G14700.1 Phenylpropanoid CSE low borderline
OPUNC08G21350.1 Phenylpropanoid CSE medium pass
OPUNC09G13610.1 Phenylpropanoid CSE medium pass
OPUNC09G18070.1 Phenylpropanoid CSE medium pass
OPUNC09G18150.1 Phenylpropanoid CSE low borderline
OPUNC09G18160.1 Phenylpropanoid CSE medium pass
OPUNC11G08190.1 Phenylpropanoid CSE medium pass
OPUNC12G07530.1 Phenylpropanoid CSE medium pass