PlantSME Plant secondary metabolism enzyme database

Oryza punctata (oryza_punctata)

Imported from atlas release summary for Oryza punctata.

1726
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 522 19 BAHD (204) View species results
Alkaloid pathway 400 24 7DLGT (64) View species results
Flavonoid pathway 286 12 UFGT (158) View species results
Phenylpropanoid pathway 267 11 POD (97) View species results
Rosmarinic acid pathway 143 7 C4H (63) View species results
Steroid pathway 108 13 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 359 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
OPUNC01G41510.1 Flavonoid PAL high pass
OPUNC02G22510.1 Flavonoid PAL high pass
OPUNC02G22520.1 Flavonoid PAL medium pass
OPUNC02G22530.1 Flavonoid PAL high pass
OPUNC02G22540.1 Flavonoid PAL high pass
OPUNC02G22550.1 Flavonoid PAL high pass
OPUNC02G22560.1 Flavonoid PAL high pass
OPUNC04G16580.1 Flavonoid PAL high pass
OPUNC04G16600.1 Flavonoid PAL high pass
OPUNC05G03320.1 Flavonoid PAL low borderline
OPUNC05G15280.1 Flavonoid PAL high pass
OPUNC08G08720.1 Flavonoid PAL low borderline
OPUNC11G20190.1 Flavonoid PAL high pass
OPUNC11G20200.1 Flavonoid PAL medium pass
OPUNC01G41510.1 Phenylpropanoid PAL high pass
OPUNC02G22510.1 Phenylpropanoid PAL high pass
OPUNC02G22520.1 Phenylpropanoid PAL medium pass
OPUNC02G22530.1 Phenylpropanoid PAL high pass
OPUNC02G22540.1 Phenylpropanoid PAL high pass
OPUNC02G22550.1 Phenylpropanoid PAL high pass
OPUNC02G22560.1 Phenylpropanoid PAL high pass
OPUNC04G16580.1 Phenylpropanoid PAL high pass
OPUNC04G16600.1 Phenylpropanoid PAL high pass
OPUNC05G03320.1 Phenylpropanoid PAL low borderline
OPUNC05G15280.1 Phenylpropanoid PAL high pass
OPUNC08G08720.1 Phenylpropanoid PAL low borderline
OPUNC11G20190.1 Phenylpropanoid PAL high pass
OPUNC11G20200.1 Phenylpropanoid PAL medium pass
OPUNC01G41510.1 Rosmarinic Acid PAL high pass
OPUNC02G22510.1 Rosmarinic Acid PAL high pass
OPUNC02G22520.1 Rosmarinic Acid PAL medium pass
OPUNC02G22530.1 Rosmarinic Acid PAL high pass
OPUNC02G22540.1 Rosmarinic Acid PAL high pass
OPUNC02G22550.1 Rosmarinic Acid PAL high pass
OPUNC02G22560.1 Rosmarinic Acid PAL high pass
OPUNC04G16580.1 Rosmarinic Acid PAL high pass
OPUNC04G16600.1 Rosmarinic Acid PAL high pass
OPUNC05G03320.1 Rosmarinic Acid PAL low borderline
OPUNC05G15280.1 Rosmarinic Acid PAL high pass
OPUNC08G08720.1 Rosmarinic Acid PAL low borderline
OPUNC11G20190.1 Rosmarinic Acid PAL high pass
OPUNC11G20200.1 Rosmarinic Acid PAL medium pass