PlantSME Plant secondary metabolism enzyme database

Oryza punctata (oryza_punctata)

Imported from atlas release summary for Oryza punctata.

1726
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 522 19 BAHD (204) View species results
Alkaloid pathway 400 24 7DLGT (64) View species results
Flavonoid pathway 286 12 UFGT (158) View species results
Phenylpropanoid pathway 267 11 POD (97) View species results
Rosmarinic acid pathway 143 7 C4H (63) View species results
Steroid pathway 108 13 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 359 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
OPUNC07G06190.1 Alkaloid T3O low borderline
OPUNC07G07050.1 Alkaloid T3O medium borderline
OPUNC07G12180.1 Alkaloid T3O low borderline
OPUNC07G13720.1 Alkaloid T3O medium pass
OPUNC07G15150.1 Alkaloid T3O medium pass
OPUNC07G15150.2 Alkaloid T3O medium pass
OPUNC07G15150.3 Alkaloid T3O low borderline
OPUNC07G15170.1 Alkaloid T3O medium pass
OPUNC07G24960.1 Alkaloid T3O medium pass
OPUNC08G00450.2 Alkaloid T3O medium borderline
OPUNC08G02820.1 Alkaloid T3O medium borderline
OPUNC08G07680.1 Alkaloid T3O low borderline
OPUNC08G07690.1 Alkaloid T3O low borderline
OPUNC08G09650.1 Alkaloid T3O low borderline
OPUNC08G10060.1 Alkaloid T3O medium borderline
OPUNC08G10090.1 Alkaloid T3O medium borderline
OPUNC08G10120.1 Alkaloid T3O medium borderline
OPUNC08G10150.1 Alkaloid T3O medium borderline
OPUNC08G18040.1 Alkaloid T3O medium borderline
OPUNC08G20770.1 Alkaloid T3O medium borderline
OPUNC09G02580.1 Alkaloid T3O medium borderline
OPUNC09G10300.1 Alkaloid T3O medium borderline
OPUNC09G10310.1 Alkaloid T3O medium borderline
OPUNC09G10310.2 Alkaloid T3O medium borderline
OPUNC09G10670.1 Alkaloid T3O medium borderline
OPUNC09G10680.1 Alkaloid T3O medium borderline
OPUNC09G15700.1 Alkaloid T3O medium borderline
OPUNC10G02790.1 Alkaloid T3O medium borderline
OPUNC10G02990.1 Alkaloid T3O medium borderline
OPUNC10G03200.1 Alkaloid T3O medium borderline
OPUNC10G03210.1 Alkaloid T3O medium borderline
OPUNC10G03280.1 Alkaloid T3O medium borderline
OPUNC10G03600.1 Alkaloid T3O medium pass
OPUNC10G06540.1 Alkaloid T3O medium borderline
OPUNC10G08050.1 Alkaloid T3O medium borderline
OPUNC10G09700.1 Alkaloid T3O medium pass
OPUNC10G09700.2 Alkaloid T3O medium pass
OPUNC10G09700.3 Alkaloid T3O medium pass
OPUNC10G09700.4 Alkaloid T3O medium pass
OPUNC10G12290.1 Alkaloid T3O low borderline
OPUNC10G14050.1 Alkaloid T3O medium borderline
OPUNC10G14110.1 Alkaloid T3O medium borderline
OPUNC10G14830.1 Alkaloid T3O medium pass
OPUNC10G14830.2 Alkaloid T3O medium pass
OPUNC10G14830.3 Alkaloid T3O medium pass
OPUNC10G14830.4 Alkaloid T3O medium pass
OPUNC10G14830.5 Alkaloid T3O medium pass
OPUNC10G14830.6 Alkaloid T3O medium pass
OPUNC11G09770.1 Alkaloid T3O medium pass
OPUNC11G11140.1 Alkaloid T3O medium borderline