PlantSME Plant secondary metabolism enzyme database

Oryza punctata (oryza_punctata)

Imported from atlas release summary for Oryza punctata.

1726
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 522 19 BAHD (204) View species results
Alkaloid pathway 400 24 7DLGT (64) View species results
Flavonoid pathway 286 12 UFGT (158) View species results
Phenylpropanoid pathway 267 11 POD (97) View species results
Rosmarinic acid pathway 143 7 C4H (63) View species results
Steroid pathway 108 13 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 359 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
OPUNC01G00620.1 Terpenoid AACT medium borderline
OPUNC02G06540.1 Terpenoid AACT low borderline
OPUNC02G06540.2 Terpenoid AACT low borderline
OPUNC02G06540.3 Terpenoid AACT low borderline
OPUNC02G34530.1 Terpenoid AACT medium borderline
OPUNC09G02030.1 Terpenoid AACT medium borderline
OPUNC10G10540.1 Terpenoid AACT medium borderline
OPUNC10G16880.1 Terpenoid AACT low borderline
OPUNC01G00350.1 Terpenoid BAHD medium pass
OPUNC01G02470.1 Terpenoid BAHD low borderline
OPUNC01G03490.1 Terpenoid BAHD low borderline
OPUNC01G04960.1 Terpenoid BAHD medium pass
OPUNC01G05410.1 Terpenoid BAHD medium pass
OPUNC01G09440.1 Terpenoid BAHD medium pass
OPUNC01G10730.1 Terpenoid BAHD medium pass
OPUNC01G11190.1 Terpenoid BAHD medium pass
OPUNC01G11780.1 Terpenoid BAHD low borderline
OPUNC01G11810.1 Terpenoid BAHD low borderline
OPUNC01G11880.1 Terpenoid BAHD medium pass
OPUNC01G12290.1 Terpenoid BAHD medium pass
OPUNC01G12700.1 Terpenoid BAHD medium pass
OPUNC01G12700.2 Terpenoid BAHD medium pass
OPUNC01G12920.1 Terpenoid BAHD low borderline
OPUNC01G13510.1 Terpenoid BAHD medium pass
OPUNC01G13520.1 Terpenoid BAHD low borderline
OPUNC01G13670.1 Terpenoid BAHD medium pass
OPUNC01G13680.1 Terpenoid BAHD low borderline
OPUNC01G16950.1 Terpenoid BAHD medium pass
OPUNC01G20960.1 Terpenoid BAHD medium pass
OPUNC01G20960.2 Terpenoid BAHD medium pass
OPUNC01G20960.3 Terpenoid BAHD medium pass
OPUNC01G20960.4 Terpenoid BAHD medium pass
OPUNC01G22870.1 Terpenoid BAHD medium pass
OPUNC01G22880.1 Terpenoid BAHD medium pass
OPUNC01G23670.1 Terpenoid BAHD low borderline
OPUNC01G23730.1 Terpenoid BAHD medium pass
OPUNC01G24740.1 Terpenoid BAHD medium pass
OPUNC01G24780.1 Terpenoid BAHD medium pass
OPUNC01G26570.1 Terpenoid BAHD medium pass
OPUNC01G29100.1 Terpenoid BAHD medium pass
OPUNC01G29100.2 Terpenoid BAHD medium pass
OPUNC01G29100.3 Terpenoid BAHD medium pass
OPUNC01G29100.4 Terpenoid BAHD medium pass
OPUNC01G31400.1 Terpenoid BAHD medium pass
OPUNC01G32220.1 Terpenoid BAHD medium pass
OPUNC01G32220.2 Terpenoid BAHD medium pass
OPUNC01G34980.1 Terpenoid BAHD low borderline
OPUNC01G34980.2 Terpenoid BAHD low borderline
OPUNC01G35860.1 Terpenoid BAHD medium pass
OPUNC01G36500.1 Terpenoid BAHD medium pass