Oryza punctata (oryza_punctata)
Imported from atlas release summary for Oryza punctata.
2247
Candidate Protein Records
1726
Pathway-Level Records
4697
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4697
Family-Level Calls
BAHD
6.09%
C4H
6.0%
C3'H/CYP98A
5.85%
UGT
4.13%
7DLGT
3.81%
4CL
3.77%
UFGT
3.73%
T3O
3.32%
Other Families
63.3%
More Families (97)
CYP76
149
3.17%
IFS
131
2.79%
F3'H/CYP75B
128
2.73%
POD
125
2.66%
NMT
112
2.38%
BR6OX2/CYP85A2
111
2.36%
STR
101
2.15%
DWF4/CYP90B1
100
2.13%
F3H
99
2.11%
CYP71
95
2.02%
SMT1/SMT2/SMT3
85
1.81%
CAD
69
1.47%
SGD
59
1.26%
PYKS
59
1.26%
CODM/T6ODM
51
1.09%
CAS
50
1.06%
IFR
49
1.04%
CCR
49
1.04%
TPS
49
1.04%
G8O/G8H
47
1.0%
ANR
46
0.98%
TRI/TRII
44
0.94%
T16H
43
0.92%
PAL
42
0.89%
CSE
42
0.89%
GES
41
0.87%
H6H
41
0.87%
NCS
39
0.83%
SLS
38
0.81%
HCT
38
0.81%
COMT
37
0.79%
FNS
36
0.77%
LAC
36
0.77%
PMT
35
0.75%
F5H/CYP84A
35
0.75%
RAS
35
0.75%
CYP51G1
34
0.72%
CHS
32
0.68%
16OMT
31
0.66%
DFR
31
0.66%
CYP90D1
30
0.64%
GS
28
0.6%
F3'5'H/CYP75A
23
0.49%
8HGO
22
0.47%
7DLH
21
0.45%
CPD/CYP90A1
21
0.45%
CNMT
18
0.38%
ANS/LDOX
17
0.36%
BBE
15
0.32%
TAT
15
0.32%
BR6OX1/CYP85A1
15
0.32%
COR
14
0.3%
LAMT
14
0.3%
MPO
13
0.28%
CPR
13
0.28%
IO
11
0.23%
ROT3/CYP90C1
10
0.21%
SQS/FDFT1
10
0.21%
GGPPS
10
0.21%
FPPS
10
0.21%
MCT/IspD
10
0.21%
TYDC_DDC
9
0.19%
CYP80B1
9
0.19%
MVD
9
0.19%
XMT_MXMT_DXMT
8
0.17%
AACT
8
0.17%
CCoAOMT
7
0.15%
HPPR
7
0.15%
SMO1/SMO2
6
0.13%
MVK
6
0.13%
DXS
6
0.13%
CYP80F1
5
0.11%
CYP719
5
0.11%
6OMT_4OMT_SOMT
5
0.11%
MDS/IspF
5
0.11%
PMK
5
0.11%
HMGS
5
0.11%
ISY
4
0.09%
ADC
4
0.09%
CHI
4
0.09%
HYD1
4
0.09%
DWF1
4
0.09%
FLS
3
0.06%
DET2
3
0.06%
SQE
3
0.06%
CMK/IspE
3
0.06%
HDS/IspG
3
0.06%
HMGR
3
0.06%
ODC
2
0.04%
TDC
2
0.04%
DWF7
2
0.04%
FK
2
0.04%
DWF5
2
0.04%
HDR/IspH
2
0.04%
IDI
2
0.04%
CPI1
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 522 | 19 | BAHD (204) | View species results |
| Alkaloid pathway | 400 | 24 | 7DLGT (64) | View species results |
| Flavonoid pathway | 286 | 12 | UFGT (158) | View species results |
| Phenylpropanoid pathway | 267 | 11 | POD (97) | View species results |
| Rosmarinic acid pathway | 143 | 7 | C4H (63) | View species results |
| Steroid pathway | 108 | 13 | SMT1/SMT2/SMT3 (46) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1774 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 359 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| OPUNC03G17890.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| OPUNC03G17890.2 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| OPUNC03G17890.3 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| OPUNC03G17930.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| OPUNC04G20070.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| OPUNC05G12300.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| OPUNC05G12300.2 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| OPUNC05G14160.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| OPUNC05G18260.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| OPUNC06G01650.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| OPUNC06G05640.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| OPUNC06G05650.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| OPUNC06G18380.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| OPUNC07G22090.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| OPUNC07G22090.2 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| OPUNC07G22960.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| OPUNC08G13500.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| OPUNC09G08260.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| OPUNC10G15890.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| OPUNC10G15890.2 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| OPUNC11G02940.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| OPUNC12G09650.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| OPUNC01G01240.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC01G01240.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC01G04870.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC01G04870.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC01G14020.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC01G18280.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC01G22500.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC01G22510.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC01G22520.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC01G22540.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC01G22910.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC01G27550.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OPUNC01G29220.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC01G35200.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC02G07330.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC02G07330.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC02G12740.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC02G12740.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC02G12740.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC02G13430.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC02G13430.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC03G03970.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC03G11070.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OPUNC03G12420.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC03G12430.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| OPUNC03G31430.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OPUNC03G31440.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OPUNC04G03480.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |