PlantSME Plant secondary metabolism enzyme database

Oryza punctata (oryza_punctata)

Imported from atlas release summary for Oryza punctata.

1726
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 522 19 BAHD (204) View species results
Alkaloid pathway 400 24 7DLGT (64) View species results
Flavonoid pathway 286 12 UFGT (158) View species results
Phenylpropanoid pathway 267 11 POD (97) View species results
Rosmarinic acid pathway 143 7 C4H (63) View species results
Steroid pathway 108 13 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 359 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
OPUNC09G14890.1 Flavonoid ANR low borderline
OPUNC10G11660.1 Flavonoid ANR medium pass
OPUNC10G11670.1 Flavonoid ANR medium borderline
OPUNC10G18020.1 Flavonoid ANR low borderline
OPUNC11G08830.1 Flavonoid ANR low borderline
OPUNC02G12920.1 Flavonoid ANS/LDOX medium borderline
OPUNC02G12920.2 Flavonoid ANS/LDOX medium borderline
OPUNC02G22740.1 Flavonoid ANS/LDOX medium borderline
OPUNC05G03160.1 Flavonoid ANS/LDOX medium borderline
OPUNC06G04800.1 Flavonoid ANS/LDOX medium borderline
OPUNC06G04840.1 Flavonoid ANS/LDOX medium borderline
OPUNC06G04840.2 Flavonoid ANS/LDOX medium borderline
OPUNC06G04840.4 Flavonoid ANS/LDOX medium borderline
OPUNC06G09300.1 Flavonoid ANS/LDOX medium borderline
OPUNC06G09300.2 Flavonoid ANS/LDOX medium borderline
OPUNC06G09300.3 Flavonoid ANS/LDOX medium borderline
OPUNC06G09300.4 Flavonoid ANS/LDOX medium borderline
OPUNC08G12300.1 Flavonoid ANS/LDOX medium pass
OPUNC09G05990.1 Flavonoid ANS/LDOX medium borderline
OPUNC10G16650.1 Flavonoid ANS/LDOX medium borderline
OPUNC10G16680.1 Flavonoid ANS/LDOX medium borderline
OPUNC10G16680.2 Flavonoid ANS/LDOX medium borderline
OPUNC01G27690.1 Flavonoid C4H medium borderline
OPUNC01G29410.1 Flavonoid C4H medium borderline
OPUNC01G34240.1 Flavonoid C4H medium borderline
OPUNC02G14450.1 Flavonoid C4H medium borderline
OPUNC02G14460.1 Flavonoid C4H medium borderline
OPUNC05G09990.1 Flavonoid C4H medium pass
OPUNC07G22960.1 Flavonoid C4H medium borderline
OPUNC08G10740.1 Flavonoid C4H low borderline
OPUNC03G36100.1 Flavonoid CHI medium pass
OPUNC06G06260.1 Flavonoid CHI low borderline
OPUNC12G00920.1 Flavonoid CHI medium pass
OPUNC12G00920.2 Flavonoid CHI medium pass
OPUNC01G22050.1 Flavonoid CHS medium pass
OPUNC01G22060.1 Flavonoid CHS medium pass
OPUNC01G22070.1 Flavonoid CHS medium pass
OPUNC01G22080.1 Flavonoid CHS medium pass
OPUNC05G06660.1 Flavonoid CHS medium pass
OPUNC05G06670.1 Flavonoid CHS medium pass
OPUNC05G06690.1 Flavonoid CHS medium pass
OPUNC06G09620.1 Flavonoid CHS low borderline
OPUNC07G09040.1 Flavonoid CHS medium pass
OPUNC07G10340.1 Flavonoid CHS medium pass
OPUNC07G14120.1 Flavonoid CHS medium pass
OPUNC07G14130.1 Flavonoid CHS medium pass
OPUNC07G15490.1 Flavonoid CHS low borderline
OPUNC07G15510.1 Flavonoid CHS medium pass
OPUNC07G15530.1 Flavonoid CHS medium pass
OPUNC10G02850.1 Flavonoid CHS medium pass