PlantSME Plant secondary metabolism enzyme database

Oryza punctata (oryza_punctata)

Imported from atlas release summary for Oryza punctata.

1726
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 522 19 BAHD (204) View species results
Alkaloid pathway 400 24 7DLGT (64) View species results
Flavonoid pathway 286 12 UFGT (158) View species results
Phenylpropanoid pathway 267 11 POD (97) View species results
Rosmarinic acid pathway 143 7 C4H (63) View species results
Steroid pathway 108 13 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 359 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
OPUNC01G19110.1 Alkaloid CODM/T6ODM medium borderline
OPUNC01G19120.1 Alkaloid CODM/T6ODM medium borderline
OPUNC01G20780.1 Alkaloid CODM/T6ODM medium borderline
OPUNC01G30460.1 Alkaloid CODM/T6ODM medium borderline
OPUNC02G10980.1 Alkaloid CODM/T6ODM medium borderline
OPUNC02G12920.1 Alkaloid CODM/T6ODM medium borderline
OPUNC02G12920.2 Alkaloid CODM/T6ODM medium borderline
OPUNC02G14580.1 Alkaloid CODM/T6ODM low borderline
OPUNC02G22740.1 Alkaloid CODM/T6ODM medium borderline
OPUNC02G31230.1 Alkaloid CODM/T6ODM medium borderline
OPUNC03G01620.1 Alkaloid CODM/T6ODM medium borderline
OPUNC03G12970.1 Alkaloid CODM/T6ODM medium borderline
OPUNC03G23900.1 Alkaloid CODM/T6ODM medium borderline
OPUNC03G23900.2 Alkaloid CODM/T6ODM medium borderline
OPUNC03G27490.1 Alkaloid CODM/T6ODM medium borderline
OPUNC03G29580.1 Alkaloid CODM/T6ODM medium borderline
OPUNC03G29600.1 Alkaloid CODM/T6ODM medium borderline
OPUNC03G38590.1 Alkaloid CODM/T6ODM medium borderline
OPUNC04G02970.1 Alkaloid CODM/T6ODM medium borderline
OPUNC04G16740.1 Alkaloid CODM/T6ODM medium borderline
OPUNC04G20410.1 Alkaloid CODM/T6ODM medium borderline
OPUNC04G26310.1 Alkaloid CODM/T6ODM medium borderline
OPUNC05G03770.1 Alkaloid CODM/T6ODM medium borderline
OPUNC05G03770.2 Alkaloid CODM/T6ODM medium borderline
OPUNC05G04790.1 Alkaloid CODM/T6ODM medium borderline
OPUNC05G06430.1 Alkaloid CODM/T6ODM medium borderline
OPUNC05G23240.1 Alkaloid CODM/T6ODM medium borderline
OPUNC06G02880.1 Alkaloid CODM/T6ODM medium borderline
OPUNC06G03350.1 Alkaloid CODM/T6ODM low borderline
OPUNC06G03950.1 Alkaloid CODM/T6ODM medium borderline
OPUNC06G04810.2 Alkaloid CODM/T6ODM medium borderline
OPUNC06G04820.1 Alkaloid CODM/T6ODM medium borderline
OPUNC06G04830.1 Alkaloid CODM/T6ODM low borderline
OPUNC06G04840.1 Alkaloid CODM/T6ODM medium borderline
OPUNC06G04840.2 Alkaloid CODM/T6ODM medium borderline
OPUNC06G04840.3 Alkaloid CODM/T6ODM medium borderline
OPUNC06G04840.4 Alkaloid CODM/T6ODM medium borderline
OPUNC06G09300.1 Alkaloid CODM/T6ODM medium borderline
OPUNC06G09300.3 Alkaloid CODM/T6ODM medium borderline
OPUNC06G09300.5 Alkaloid CODM/T6ODM medium borderline
OPUNC08G12330.1 Alkaloid CODM/T6ODM medium borderline
OPUNC08G16190.2 Alkaloid CODM/T6ODM medium borderline
OPUNC08G21600.1 Alkaloid CODM/T6ODM medium borderline
OPUNC09G18610.1 Alkaloid CODM/T6ODM medium borderline
OPUNC10G14680.7 Alkaloid CODM/T6ODM medium borderline
OPUNC10G16690.1 Alkaloid CODM/T6ODM medium borderline
OPUNC01G36040.1 Alkaloid COR medium pass
OPUNC01G36050.1 Alkaloid COR medium pass
OPUNC01G36050.2 Alkaloid COR medium pass
OPUNC01G36060.1 Alkaloid COR medium pass