Panax ginseng (panax_ginseng)
Imported from atlas release summary for Panax ginseng.
3514
Candidate Protein Records
2784
Pathway-Level Records
6926
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
6926
Family-Level Calls
BAHD
6.14%
C4H
6.02%
C3'H/CYP98A
5.34%
UGT
4.56%
POD
4.03%
4CL
3.87%
7DLGT
3.62%
IFS
3.61%
Other Families
62.81%
More Families (96)
UFGT
242
3.49%
CYP76
225
3.25%
T3O
194
2.8%
NMT
190
2.74%
F3H
190
2.74%
BBE
142
2.05%
DWF4/CYP90B1
142
2.05%
F3'H/CYP75B
129
1.86%
STR
127
1.83%
BR6OX2/CYP85A2
107
1.54%
CODM/T6ODM
106
1.53%
CAS
99
1.43%
CYP71
98
1.41%
CAD
94
1.36%
CYP90D1
90
1.3%
H6H
83
1.2%
CSE
80
1.16%
SMT1/SMT2/SMT3
78
1.13%
HCT
75
1.08%
LAC
64
0.92%
TRI/TRII
63
0.91%
PYKS
63
0.91%
PAL
63
0.91%
TPS
63
0.91%
T16H
60
0.87%
GES
58
0.84%
IFR
57
0.82%
RAS
56
0.81%
7DLH
55
0.79%
GS
54
0.78%
IO
51
0.74%
TAT
50
0.72%
G8O/G8H
49
0.71%
COMT
46
0.66%
F5H/CYP84A
46
0.66%
SLS
43
0.62%
FNS
42
0.61%
F3'5'H/CYP75A
40
0.58%
CCR
39
0.56%
NCS
37
0.53%
PMT
36
0.52%
CPR
34
0.49%
SGD
31
0.45%
ANR
30
0.43%
ROT3/CYP90C1
30
0.43%
CYP51G1
29
0.42%
8HGO
27
0.39%
COR
26
0.38%
CPD/CYP90A1
26
0.38%
HMGR
25
0.36%
16OMT
24
0.35%
DFR
24
0.35%
LAMT
22
0.32%
BR6OX1/CYP85A1
22
0.32%
SQE
22
0.32%
GGPPS
21
0.3%
MPO
20
0.29%
CYP719
18
0.26%
HPPR
18
0.26%
CYP80B1
17
0.25%
DXS
16
0.23%
FPPS
16
0.23%
CHS
15
0.22%
PMK
15
0.22%
ANS/LDOX
14
0.2%
SQS/FDFT1
13
0.19%
AACT
13
0.19%
CNMT
12
0.17%
TDC
11
0.16%
TYDC_DDC
9
0.13%
ISY
8
0.12%
CCoAOMT
8
0.12%
SMO1/SMO2
7
0.1%
DET2
7
0.1%
MVD
7
0.1%
MVK
7
0.1%
HMGS
7
0.1%
ADC
6
0.09%
XMT_MXMT_DXMT
6
0.09%
CHI
6
0.09%
HDR/IspH
6
0.09%
FLS
5
0.07%
HYD1
5
0.07%
MCT/IspD
5
0.07%
HDS/IspG
5
0.07%
DWF1
4
0.06%
DXR
4
0.06%
MDS/IspF
4
0.06%
IDI
4
0.06%
CMK/IspE
3
0.04%
ODC
2
0.03%
CPI1
2
0.03%
DWF5
2
0.03%
FK
2
0.03%
6OMT_4OMT_SOMT
1
0.01%
DWF7
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 874 | 20 | BAHD (314) | View species results |
| Alkaloid pathway | 578 | 21 | 7DLGT (117) | View species results |
| Phenylpropanoid pathway | 553 | 13 | POD (226) | View species results |
| Flavonoid pathway | 343 | 12 | UFGT (219) | View species results |
| Rosmarinic acid pathway | 254 | 7 | C4H (95) | View species results |
| Steroid pathway | 182 | 12 | CAS (87) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2508 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 556 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pg_S0605.4 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S0724.73 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S0741.50 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pg_S0745.40 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S0804.4 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S0804.5 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S0810.3 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S0889.19 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S0895.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S0907.10 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S0937.19 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S0974.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S0997.30 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1011.5 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1014.35 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1029.43 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1031.10 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pg_S1055.17 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1078.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1078.2 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1080.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1095.3 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1106.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1241.9 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1290.27 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pg_S1292.12 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1296.21 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1334.14 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1361.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1416.25 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1437.13 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1460.6 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1491.5 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1503.16 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1527.5 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1530.23 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pg_S1566.11 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pg_S1675.11 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1717.8 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pg_S1790.6 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1831.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pg_S1831.2 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Pg_S1852.4 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1874.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1893.4 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S1948.9 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S2015.26 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S2119.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S2120.6 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Pg_S2139.6 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |