PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pg_S1774.9 Alkaloid 7DLH medium borderline
Pg_S1952.5 Alkaloid 7DLH medium borderline
Pg_S1989.3 Alkaloid 7DLH medium borderline
Pg_S2058.1 Alkaloid 7DLH medium borderline
Pg_S2058.3 Alkaloid 7DLH medium borderline
Pg_S2058.4 Alkaloid 7DLH medium borderline
Pg_S2299.16 Alkaloid 7DLH medium borderline
Pg_S2398.1 Alkaloid 7DLH medium borderline
Pg_S2523.2 Alkaloid 7DLH medium borderline
Pg_S2748.15 Alkaloid 7DLH low borderline
Pg_S3488.14 Alkaloid 7DLH medium borderline
Pg_S3724.15 Alkaloid 7DLH medium borderline
Pg_S3828.5 Alkaloid 7DLH medium borderline
Pg_S3862.4 Alkaloid 7DLH medium borderline
Pg_S3862.5 Alkaloid 7DLH medium borderline
Pg_S4081.4 Alkaloid 7DLH low borderline
Pg_S4684.12 Alkaloid 7DLH medium borderline
Pg_S4706.3 Alkaloid 7DLH low borderline
Pg_S5024.11 Alkaloid 7DLH medium borderline
Pg_S5049.11 Alkaloid 7DLH medium borderline
Pg_S5185.5 Alkaloid 7DLH medium borderline
Pg_S5185.6 Alkaloid 7DLH medium borderline
Pg_S5479.6 Alkaloid 7DLH medium borderline
Pg_S5503.3 Alkaloid 7DLH medium borderline
Pg_S5844.1 Alkaloid 7DLH medium borderline
Pg_S6069.1 Alkaloid 7DLH medium borderline
Pg_S6069.4 Alkaloid 7DLH medium pass
Pg_S6088.1 Alkaloid 7DLH medium borderline
Pg_S6850.1 Alkaloid 7DLH medium borderline
Pg_S6850.3 Alkaloid 7DLH medium borderline
Pg_S7477.1 Alkaloid 7DLH medium borderline
Pg_S0168.4 Alkaloid 8HGO low borderline
Pg_S0170.9 Alkaloid 8HGO low borderline
Pg_S0402.10 Alkaloid 8HGO medium borderline
Pg_S0402.9 Alkaloid 8HGO medium borderline
Pg_S0408.51 Alkaloid 8HGO low borderline
Pg_S0476.8 Alkaloid 8HGO medium borderline
Pg_S0476.9 Alkaloid 8HGO medium borderline
Pg_S0688.7 Alkaloid 8HGO medium borderline
Pg_S0753.13 Alkaloid 8HGO medium borderline
Pg_S0769.10 Alkaloid 8HGO low borderline
Pg_S0871.14 Alkaloid 8HGO low borderline
Pg_S0996.5 Alkaloid 8HGO low borderline
Pg_S1079.2 Alkaloid 8HGO low borderline
Pg_S1185.31 Alkaloid 8HGO medium borderline
Pg_S1373.25 Alkaloid 8HGO low borderline
Pg_S1663.1 Alkaloid 8HGO low borderline
Pg_S1862.20 Alkaloid 8HGO medium pass
Pg_S2144.3 Alkaloid 8HGO medium borderline
Pg_S2533.8 Alkaloid 8HGO medium pass