PlantSME Plant secondary metabolism enzyme database

Plagiochasma appendiculatum (plagiochasma_appendiculatum)

Imported from atlas release summary for Plagiochasma appendiculatum.

633
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 194 11 POD (115) View species results
Terpenoid pathway 146 18 BAHD (50) View species results
Alkaloid pathway 126 18 T3O (30) View species results
Flavonoid pathway 69 8 UFGT (25) View species results
Rosmarinic acid pathway 62 7 C4H (35) View species results
Steroid pathway 36 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 850 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Pappscaffold_80199600 Rosmarinic Acid CPR medium pass
Pappscaffold_50113660 Rosmarinic Acid HPPR medium pass
Pappscaffold_20030210 Rosmarinic Acid PAL low borderline
Pappscaffold_20033750 Rosmarinic Acid PAL high pass
Pappscaffold_20042120 Rosmarinic Acid PAL high pass
Pappscaffold_20042140 Rosmarinic Acid PAL high pass
Pappscaffold_20042280 Rosmarinic Acid PAL high pass
Pappscaffold_20042430 Rosmarinic Acid PAL medium pass
Pappscaffold_50098740 Rosmarinic Acid PAL high pass
Pappscaffold_10000910 Rosmarinic Acid RAS low borderline
Pappscaffold_10002990 Rosmarinic Acid RAS low borderline
Pappscaffold_20023580 Rosmarinic Acid RAS low borderline
Pappscaffold_20023810 Rosmarinic Acid RAS medium pass
Pappscaffold_20024170 Rosmarinic Acid RAS low borderline
Pappscaffold_20036600 Rosmarinic Acid RAS medium pass
Pappscaffold_30054810 Rosmarinic Acid RAS low borderline
Pappscaffold_30061770 Rosmarinic Acid RAS low borderline
Pappscaffold_30067050 Rosmarinic Acid RAS low borderline
Pappscaffold_40077100 Rosmarinic Acid RAS low borderline
Pappscaffold_40078420 Rosmarinic Acid RAS medium pass
Pappscaffold_40083400 Rosmarinic Acid RAS medium pass
Pappscaffold_50105290 Rosmarinic Acid RAS medium pass
Pappscaffold_50116130 Rosmarinic Acid RAS medium pass
Pappscaffold_50117410 Rosmarinic Acid RAS low borderline
Pappscaffold_50117430 Rosmarinic Acid RAS low borderline
Pappscaffold_50123840 Rosmarinic Acid RAS low borderline
Pappscaffold_50124130 Rosmarinic Acid RAS low borderline
Pappscaffold_70176420 Rosmarinic Acid RAS low borderline
Pappscaffold_10000920 Rosmarinic Acid TAT low borderline
Pappscaffold_10000930 Rosmarinic Acid TAT low borderline
Pappscaffold_10002280 Rosmarinic Acid TAT low borderline
Pappscaffold_10013360 Rosmarinic Acid TAT medium pass
Pappscaffold_20045410 Rosmarinic Acid TAT low borderline
Pappscaffold_30050640 Rosmarinic Acid TAT low borderline
Pappscaffold_70178460 Rosmarinic Acid TAT low borderline
Pappscaffold_80197400 Rosmarinic Acid TAT medium pass