PlantSME Plant secondary metabolism enzyme database

Plagiochasma appendiculatum (plagiochasma_appendiculatum)

Imported from atlas release summary for Plagiochasma appendiculatum.

922
Candidate Protein Records
633
Pathway-Level Records
1882
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 194 11 POD (115) View species results
Terpenoid pathway 146 18 BAHD (50) View species results
Alkaloid pathway 126 18 T3O (30) View species results
Flavonoid pathway 69 8 UFGT (25) View species results
Rosmarinic acid pathway 62 7 C4H (35) View species results
Steroid pathway 36 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 850 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pappscaffold_50096220 Alkaloid NMT low borderline
Pappscaffold_50096390 Alkaloid NMT low borderline
Pappscaffold_50099000 Alkaloid NMT low borderline
Pappscaffold_50103370 Alkaloid NMT low borderline
Pappscaffold_50110340 Alkaloid NMT low borderline
Pappscaffold_50110420 Alkaloid NMT low borderline
Pappscaffold_50114540 Alkaloid NMT medium pass
Pappscaffold_50115100 Alkaloid NMT low borderline
Pappscaffold_50124050 Alkaloid NMT low borderline
Pappscaffold_60131570 Alkaloid NMT low borderline
Pappscaffold_60132510 Alkaloid NMT medium borderline
Pappscaffold_60134300 Alkaloid NMT medium pass
Pappscaffold_60134380 Alkaloid NMT medium borderline
Pappscaffold_60135380 Alkaloid NMT low borderline
Pappscaffold_60146160 Alkaloid NMT low borderline
Pappscaffold_60147880 Alkaloid NMT low borderline
Pappscaffold_70176470 Alkaloid NMT low borderline
Pappscaffold_70179150 Alkaloid NMT medium borderline
Pappscaffold_70179160 Alkaloid NMT medium borderline
Pappscaffold_80185880 Alkaloid NMT medium pass
Pappscaffold_80187370 Alkaloid NMT medium borderline
Pappscaffold_80195200 Alkaloid NMT low borderline
Pappscaffold_80196120 Alkaloid NMT low borderline
Pappscaffold_80197160 Alkaloid NMT low borderline
Pappscaffold_80198860 Alkaloid NMT medium borderline
Pappscaffold_80199200 Alkaloid NMT low borderline
Pappscaffold_80199230 Alkaloid NMT low borderline
Pappscaffold_80199820 Alkaloid NMT low borderline
Pappscaffold_80199910 Alkaloid NMT low borderline
Pappscaffold_80202980 Alkaloid NMT medium borderline
Pappscaffold_50111520 Alkaloid ODC low borderline
Pappscaffold_10005360 Alkaloid PMT medium pass
Pappscaffold_20023810 Alkaloid PMT low borderline
Pappscaffold_40085770 Alkaloid PMT medium borderline
Pappscaffold_50126280 Alkaloid PMT low borderline
Pappscaffold_20031090 Alkaloid PYKS high pass
Pappscaffold_20037180 Alkaloid PYKS high pass
Pappscaffold_20039680 Alkaloid PYKS high pass
Pappscaffold_20042150 Alkaloid PYKS high pass
Pappscaffold_20042160 Alkaloid PYKS high pass
Pappscaffold_30060670 Alkaloid PYKS high pass
Pappscaffold_50098480 Alkaloid PYKS low borderline
Pappscaffold_50109880 Alkaloid PYKS low borderline
Pappscaffold_50113580 Alkaloid PYKS high pass
Pappscaffold_60128190 Alkaloid PYKS high pass
Pappscaffold_60135500 Alkaloid PYKS low borderline
Pappscaffold_60136190 Alkaloid PYKS high pass
Pappscaffold_60140030 Alkaloid PYKS high pass
Pappscaffold_60146170 Alkaloid PYKS medium pass
Pappscaffold_60146820 Alkaloid PYKS high pass