PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
POcom1050011900 Alkaloid T3O low borderline
POcom1370018620 Alkaloid T3O medium borderline
POcom1420019560 Alkaloid T3O medium pass
POcom1420020120 Alkaloid T3O medium borderline
POcom1640024930 Alkaloid T3O low borderline
POcom2130042990 Alkaloid T3O low borderline
POcom2190046270 Alkaloid T3O medium borderline
POcom2280049460 Alkaloid T3O medium borderline
POcom2310052050 Alkaloid T3O medium borderline
POcom2370057200 Alkaloid T3O medium pass
POcom2480066030 Alkaloid T3O medium borderline
POcom2500067440 Alkaloid T3O medium borderline
POcom2520070080 Alkaloid T3O medium borderline
POcom2550072980 Alkaloid T3O medium pass
POcom2600079140 Alkaloid T3O medium pass
POcom2610080330 Alkaloid T3O medium borderline
POcom2610080820 Alkaloid T3O medium pass
POcom2630083050 Alkaloid T3O medium borderline
POcom2660086700 Alkaloid T3O medium borderline
POcom2670088110 Alkaloid T3O medium borderline
POcom2670088190 Alkaloid T3O medium borderline
POcom612170102130 Alkaloid T3O low borderline
POcom700117300 Alkaloid T3O medium borderline
POcom710121070 Alkaloid T3O low borderline
POcom805110137900 Alkaloid T3O low borderline
POcom813700161390 Alkaloid T3O medium borderline
POcom814220167750 Alkaloid T3O medium borderline
POcom814280167980 Alkaloid T3O medium borderline
POcom814920176290 Alkaloid T3O medium pass
POcom815010177500 Alkaloid T3O low borderline
POcom815810191250 Alkaloid T3O low borderline
POcom816100193950 Alkaloid T3O medium borderline
POcom816100193980 Alkaloid T3O medium borderline
POcom816100194010 Alkaloid T3O medium borderline
POcom816860201890 Alkaloid T3O medium borderline
POcom817240208890 Alkaloid T3O medium borderline
POcom817240208900 Alkaloid T3O medium borderline
POcom817880228870 Alkaloid T3O medium borderline
POcom890246400 Alkaloid T3O medium borderline
POcom920249400 Alkaloid T3O medium pass
POcom920249420 Alkaloid T3O medium pass
POcom920249500 Alkaloid T3O medium borderline
POcom970255030 Alkaloid T3O medium borderline
POcom980255670 Alkaloid T3O low borderline
POcom980256460 Alkaloid T3O medium borderline
POcom980256660 Alkaloid T3O medium pass