PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
POcom2430062070 Terpenoid AACT medium borderline
POcom2600079270 Terpenoid AACT medium borderline
POcom700117980 Terpenoid AACT medium borderline
POcom724930123430 Terpenoid AACT medium borderline
POcom814300168800 Terpenoid AACT low borderline
POcom817800225170 Terpenoid AACT medium borderline
POcom1000000340 Terpenoid BAHD medium pass
POcom1000001730 Terpenoid BAHD medium pass
POcom1020005720 Terpenoid BAHD medium pass
POcom1020005730 Terpenoid BAHD medium pass
POcom1020006040 Terpenoid BAHD medium pass
POcom1020006630 Terpenoid BAHD medium pass
POcom1030007170 Terpenoid BAHD low borderline
POcom1050012230 Terpenoid BAHD medium pass
POcom1137870014610 Terpenoid BAHD medium pass
POcom1137900014700 Terpenoid BAHD medium pass
POcom1830029160 Terpenoid BAHD medium pass
POcom1830029670 Terpenoid BAHD medium pass
POcom1860031000 Terpenoid BAHD medium pass
POcom2160044460 Terpenoid BAHD medium pass
POcom2170045080 Terpenoid BAHD medium pass
POcom2240047930 Terpenoid BAHD low borderline
POcom2340053390 Terpenoid BAHD medium pass
POcom2340053940 Terpenoid BAHD medium pass
POcom2340054190 Terpenoid BAHD medium pass
POcom2370056680 Terpenoid BAHD medium pass
POcom2400060580 Terpenoid BAHD medium pass
POcom2500066570 Terpenoid BAHD medium pass
POcom2520069040 Terpenoid BAHD medium pass
POcom2520070090 Terpenoid BAHD medium pass
POcom2540071930 Terpenoid BAHD medium pass
POcom2540072260 Terpenoid BAHD medium pass
POcom2560073320 Terpenoid BAHD medium pass
POcom2570075720 Terpenoid BAHD medium pass
POcom2640083490 Terpenoid BAHD low borderline
POcom2660087070 Terpenoid BAHD medium pass
POcom2660087250 Terpenoid BAHD medium borderline
POcom2670088730 Terpenoid BAHD medium pass
POcom2670090940 Terpenoid BAHD medium pass
POcom2690092990 Terpenoid BAHD medium pass
POcom2690093090 Terpenoid BAHD medium pass
POcom2700094530 Terpenoid BAHD medium pass
POcom457460095560 Terpenoid BAHD low borderline
POcom462270096100 Terpenoid BAHD low borderline
POcom615740102530 Terpenoid BAHD medium pass
POcom640104890 Terpenoid BAHD low borderline
POcom660108990 Terpenoid BAHD medium pass
POcom690114780 Terpenoid BAHD medium pass
POcom700117280 Terpenoid BAHD medium pass
POcom700117670 Terpenoid BAHD medium pass