PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
POcom700118580 Terpenoid BAHD medium pass
POcom700118610 Terpenoid BAHD medium pass
POcom710121650 Terpenoid BAHD low borderline
POcom710121660 Terpenoid BAHD low borderline
POcom780130430 Terpenoid BAHD medium pass
POcom790131750 Terpenoid BAHD low borderline
POcom809530142420 Terpenoid BAHD low borderline
POcom810560144970 Terpenoid BAHD low borderline
POcom812360150080 Terpenoid BAHD medium pass
POcom812850153270 Terpenoid BAHD medium pass
POcom813530159100 Terpenoid BAHD low borderline
POcom813720161710 Terpenoid BAHD medium pass
POcom813900162970 Terpenoid BAHD medium pass
POcom814130166610 Terpenoid BAHD low borderline
POcom814350169740 Terpenoid BAHD medium pass
POcom814360170350 Terpenoid BAHD low borderline
POcom814920176660 Terpenoid BAHD low borderline
POcom815200181330 Terpenoid BAHD medium pass
POcom815400183040 Terpenoid BAHD low borderline
POcom815990193780 Terpenoid BAHD medium pass
POcom816550198020 Terpenoid BAHD medium pass
POcom816670198600 Terpenoid BAHD medium pass
POcom816830200950 Terpenoid BAHD low borderline
POcom816830201150 Terpenoid BAHD low borderline
POcom816890202660 Terpenoid BAHD low borderline
POcom817010205910 Terpenoid BAHD medium pass
POcom817290211440 Terpenoid BAHD low borderline
POcom817380212470 Terpenoid BAHD medium pass
POcom817390214210 Terpenoid BAHD medium pass
POcom817450215240 Terpenoid BAHD low borderline
POcom817450215260 Terpenoid BAHD low borderline
POcom817470216350 Terpenoid BAHD medium pass
POcom817690223620 Terpenoid BAHD low borderline
POcom817780224360 Terpenoid BAHD medium pass
POcom817790225000 Terpenoid BAHD medium pass
POcom817880229400 Terpenoid BAHD low borderline
POcom817920230770 Terpenoid BAHD medium pass
POcom818080237270 Terpenoid BAHD low borderline
POcom850242040 Terpenoid BAHD medium pass
POcom860242830 Terpenoid BAHD medium pass
POcom900247850 Terpenoid BAHD low borderline
POcom910248680 Terpenoid BAHD low borderline
POcom950251930 Terpenoid BAHD low borderline
POcom960253910 Terpenoid BAHD low borderline
POcom1050012220 Terpenoid CMK/IspE medium pass
POcom2580076960 Terpenoid CMK/IspE low borderline
POcom830239330 Terpenoid CMK/IspE high pass
POcom1610022780 Terpenoid CYP71 medium pass
POcom1770027240 Terpenoid CYP71 low borderline
POcom2040038910 Terpenoid CYP71 medium pass