PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
POcom1210016430 Flavonoid 4CL medium pass
POcom1550022140 Flavonoid 4CL medium pass
POcom1910034750 Flavonoid 4CL medium pass
POcom2090041490 Flavonoid 4CL low borderline
POcom2440063000 Flavonoid 4CL low borderline
POcom2500066820 Flavonoid 4CL medium pass
POcom2500067280 Flavonoid 4CL low borderline
POcom2670089500 Flavonoid 4CL low borderline
POcom457650095670 Flavonoid 4CL medium pass
POcom628900102730 Flavonoid 4CL medium pass
POcom660108650 Flavonoid 4CL medium pass
POcom660108780 Flavonoid 4CL low borderline
POcom727730123560 Flavonoid 4CL low borderline
POcom733500124480 Flavonoid 4CL low borderline
POcom801060135520 Flavonoid 4CL low borderline
POcom801930136090 Flavonoid 4CL low borderline
POcom807220140040 Flavonoid 4CL low borderline
POcom814410171020 Flavonoid 4CL medium pass
POcom814630174020 Flavonoid 4CL low borderline
POcom814630174040 Flavonoid 4CL medium pass
POcom816670198520 Flavonoid 4CL low borderline
POcom817380213310 Flavonoid 4CL medium pass
POcom817490217830 Flavonoid 4CL low borderline
POcom817850225760 Flavonoid 4CL medium pass
POcom817850226590 Flavonoid 4CL medium pass
POcom817850226610 Flavonoid 4CL medium pass
POcom818030234090 Flavonoid 4CL low borderline
POcom890246370 Flavonoid 4CL low borderline
POcom906120248310 Flavonoid 4CL medium pass
POcom906130248340 Flavonoid 4CL medium pass
POcom940251060 Flavonoid 4CL low borderline
POcom1010002840 Flavonoid ANR low borderline
POcom1020006480 Flavonoid ANR low borderline
POcom1279340016900 Flavonoid ANR medium borderline
POcom1279350016920 Flavonoid ANR medium borderline
POcom2650085710 Flavonoid ANR low borderline
POcom2680091910 Flavonoid ANR low borderline
POcom790131970 Flavonoid ANR medium borderline
POcom802120136150 Flavonoid ANR medium borderline
POcom920249530 Flavonoid ANR medium borderline
POcom814200167560 Flavonoid ANS/LDOX medium borderline
POcom817240209740 Flavonoid ANS/LDOX medium borderline
POcom910660249050 Flavonoid ANS/LDOX medium borderline
POcom910670249060 Flavonoid ANS/LDOX medium borderline
POcom2290050090 Flavonoid C4H medium borderline
POcom473990097460 Flavonoid C4H medium borderline
POcom651180108270 Flavonoid C4H medium borderline
POcom810570145180 Flavonoid C4H medium borderline
POcom810570145190 Flavonoid C4H medium borderline
POcom815810191050 Flavonoid C4H medium borderline