PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

890
Candidate Protein Records
606
Pathway-Level Records
1772
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
POcom805110137900 Alkaloid T3O low borderline
POcom813700161390 Alkaloid T3O medium borderline
POcom814220167750 Alkaloid T3O medium borderline
POcom814280167980 Alkaloid T3O medium borderline
POcom814920176290 Alkaloid T3O medium pass
POcom815010177500 Alkaloid T3O low borderline
POcom815810191250 Alkaloid T3O low borderline
POcom816100193950 Alkaloid T3O medium borderline
POcom816100193980 Alkaloid T3O medium borderline
POcom816100194010 Alkaloid T3O medium borderline
POcom816860201890 Alkaloid T3O medium borderline
POcom817240208890 Alkaloid T3O medium borderline
POcom817240208900 Alkaloid T3O medium borderline
POcom817880228870 Alkaloid T3O medium borderline
POcom890246400 Alkaloid T3O medium borderline
POcom920249400 Alkaloid T3O medium pass
POcom920249420 Alkaloid T3O medium pass
POcom920249500 Alkaloid T3O medium borderline
POcom970255030 Alkaloid T3O medium borderline
POcom980255670 Alkaloid T3O low borderline
POcom980256460 Alkaloid T3O medium borderline
POcom980256660 Alkaloid T3O medium pass
POcom1030007460 Alkaloid TDC low borderline
POcom1030007500 Alkaloid TDC low borderline
POcom1040008410 Alkaloid TRI/TRII medium pass
POcom1050010880 Alkaloid TRI/TRII medium pass
POcom1050011890 Alkaloid TRI/TRII low borderline
POcom1610022580 Alkaloid TRI/TRII low borderline
POcom1810028410 Alkaloid TRI/TRII medium pass
POcom2560073610 Alkaloid TRI/TRII medium pass
POcom2670091260 Alkaloid TRI/TRII low borderline
POcom455190095380 Alkaloid TRI/TRII low borderline
POcom482470098690 Alkaloid TRI/TRII low borderline
POcom746090125780 Alkaloid TRI/TRII medium pass
POcom817390214040 Alkaloid TRI/TRII medium pass
POcom817900229790 Alkaloid TRI/TRII low borderline
POcom817920230550 Alkaloid TRI/TRII low borderline
POcom900247910 Alkaloid TRI/TRII medium pass
POcom930250430 Alkaloid TRI/TRII low borderline
POcom980256620 Alkaloid TRI/TRII medium pass
POcom2660086340 Alkaloid TYDC_DDC low borderline
POcom815560184410 Alkaloid TYDC_DDC medium borderline