PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

890
Candidate Protein Records
606
Pathway-Level Records
1772
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
POcom809420142250 Steroid CYP90D1 low borderline
POcom815790190040 Steroid CYP90D1 low borderline
POcom816190195630 Steroid CYP90D1 low borderline
POcom830239400 Steroid CYP90D1 low borderline
POcom830239430 Steroid CYP90D1 low borderline
POcom920249400 Steroid CYP90D1 medium borderline
POcom980256460 Steroid CYP90D1 low borderline
POcom980256710 Steroid CYP90D1 low borderline
POcom2170044980 Steroid DET2 low borderline
POcom2670090120 Steroid DET2 low borderline
POcom2600079480 Steroid DWF1 medium pass
POcom2600079490 Steroid DWF1 medium pass
POcom729970123670 Steroid DWF1 medium pass
POcom812560151830 Steroid DWF1 medium pass
POcom1050011900 Steroid DWF4/CYP90B1 low borderline
POcom1279410017050 Steroid DWF4/CYP90B1 low borderline
POcom1279420017060 Steroid DWF4/CYP90B1 low borderline
POcom1370018620 Steroid DWF4/CYP90B1 low borderline
POcom1420020110 Steroid DWF4/CYP90B1 low borderline
POcom1670026330 Steroid DWF4/CYP90B1 low borderline
POcom2130042990 Steroid DWF4/CYP90B1 medium borderline
POcom2280049460 Steroid DWF4/CYP90B1 low borderline
POcom2340053520 Steroid DWF4/CYP90B1 low borderline
POcom2380058400 Steroid DWF4/CYP90B1 low borderline
POcom2480065860 Steroid DWF4/CYP90B1 low borderline
POcom2480066030 Steroid DWF4/CYP90B1 low borderline
POcom2550072980 Steroid DWF4/CYP90B1 medium borderline
POcom2580076070 Steroid DWF4/CYP90B1 medium borderline
POcom2580076620 Steroid DWF4/CYP90B1 low borderline
POcom2610080300 Steroid DWF4/CYP90B1 medium pass
POcom2610080330 Steroid DWF4/CYP90B1 low borderline
POcom2610080820 Steroid DWF4/CYP90B1 low borderline
POcom2630083050 Steroid DWF4/CYP90B1 low borderline
POcom2670088190 Steroid DWF4/CYP90B1 medium borderline
POcom464340096300 Steroid DWF4/CYP90B1 low borderline
POcom612170102130 Steroid DWF4/CYP90B1 low borderline
POcom640102950 Steroid DWF4/CYP90B1 low borderline
POcom651180108270 Steroid DWF4/CYP90B1 low borderline
POcom700117300 Steroid DWF4/CYP90B1 low borderline
POcom700117420 Steroid DWF4/CYP90B1 low borderline
POcom710121060 Steroid DWF4/CYP90B1 medium borderline
POcom710121070 Steroid DWF4/CYP90B1 medium borderline
POcom715260123000 Steroid DWF4/CYP90B1 low borderline
POcom810570145390 Steroid DWF4/CYP90B1 low borderline
POcom813700161390 Steroid DWF4/CYP90B1 low borderline
POcom814280167980 Steroid DWF4/CYP90B1 low borderline
POcom814580173010 Steroid DWF4/CYP90B1 low borderline
POcom814960177210 Steroid DWF4/CYP90B1 low borderline
POcom815010177440 Steroid DWF4/CYP90B1 low borderline
POcom815400182640 Steroid DWF4/CYP90B1 low borderline